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Putative Agrobacterium vitis CG678 RM systems
Ref: Lin,Y.-C. et al. unpublished
REBASE ref # 33132
Sequence length: | GenBank #: | |
chromosome 1: | 3,745,902 bp | CP056042 |
plasmid pAvCG678b: | 370,902 bp | CP056045 |
REBASE acronym: Avi678
Org_num: 52867
All begin AVCG678_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
2195 | DUF1284 domain-containing protein | |||
2200 | M | M.AviS4ORF1084P (100% identity) | GANTC | M.Avi678ORF2200P |
2205 | 618 aa hypothetical protein | |||
6950 | 143 aa hypothetical protein | |||
6955 | M | M1.Avi78ORF6955P (100% identity) | M1.Avi678ORF6955P | |
6960 | 153 aa hypothetical protein | |||
6965 | 169 aa hypothetical protein | |||
6970 | 106 aa hypothetical protein | |||
6975 | M | M2.Avi78ORF6955P (100% identity) | M2.Avi678ORF6955P | |
6980 | 422 aa hypothetical protein | |||
9955 | 159 aa hypothetical protein | |||
9960 | M | M.Avi78ORF9960P (100% identity) | M.Avi678ORF9960P | |
9965 | cold-shock protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pAvCG678b | ||||
25820 | 159 aa hypothetical protein | |||
25825 | M | M.Avi78ORF25830P (100% identity) | M.Avi678ORF25825P | |
25830 | R | Avi78ORF25830P (100% identity) | Avi678ORF25825P | |
25835 | 164 aa hypothetical protein |