Escherichia coli STO_Bone4 |
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Putative Escherichia coli STO_Bone4 RM systems
Ref: Li,F. et al. unpublished
REBASE ref # 33409
| Sequence length: | GenBank #: | |
| Chromosome: | 4,377,204 bp | CP054251 |
| plasmid pBone4_5: | 542,131 bp | CP054248 |
| plasmid pBone4IncF: | 174,444 bp | CP054250 |
REBASE acronym: EcoBone4
Org_num: 53928
All begin HRS06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7375 | type IV toxin-antitoxin system AbiEi family | |||
| 7380 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoBone4ORF7385P |
| 7385 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoBone4ORF7385P |
| 7390 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoBone4ORF7385P |
| 7395 | ash family protein | |||
| 14565 | endoribonuclease SymE | |||
| 14570 | R | EcosS9ORF3165P (99% identity) | RTACNNNNGTG | EcoBone4ORF14580P |
| 14575 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoBone4ORF14580P |
| 14580 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoBone4ORF14580P |
| 14585 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7550 | phage lysis protein EssD | |||
| 7555 | M | M.Sso63633ORF22290P (100% identity) | M.EcoBone4ORF7555P | |
| 7560 | 67 aa hypothetical protein | |||
| 7595 | LexA family transcriptional regulator | |||
| 7600 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoBone4ORF7600P |
| 7605 | PerC family transcriptional regulator | |||
| 8575 | ribulose-phosphate 3-epimerase | |||
| 8580 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoBone4DamP |
| 8585 | cell division protein DamX | |||
| 12350 | ead/Ea22-like family protein | |||
| 12355 | M | M.EcoS566ORF6865P (100% identity) | M.EcoBone4ORF12355P | |
| 12360 | Eae protein | |||
| 12410 | PerC family transcriptional regulator | |||
| 12415 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoBone4ORF12415P |
| 12420 | LexA family transcriptional regulator | |||
| 12450 | 67 aa hypothetical protein | |||
| 12455 | M | M.Sso63633ORF22290P (99% identity) | M.EcoBone4ORF12455P | |
| 12460 | phage lysis protein EssD | |||
| 14220 | helix-turn-helix domain-containing protein | |||
| 14225 | M | M2.EcosEC4ORF20110P (99% identity) | GGTCTC | M1.EcoBone4ORF14225P |
| 14230 | M | M2.EcosS9ORF2810P (99% identity) | GGTCTC | M2.EcoBone4ORF14225P |
| 14235 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoBone4ORF14225P |
| 14240 | McrC family protein | |||
| 16035 | DUF2556 family protein | |||
| 16040 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoBone4ORF16040P |
| 16045 | DNA-binding transcriptional regulator Fis | |||
| 20350 | DUF1382 family protein | |||
| 20355 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoBone4ORF20355P |
| 20360 | PerC family transcriptional regulator | |||
| 23440 | phosphohydrolase | |||
| 23445 | M | M.EcoSME173DcmP (100% identity) | CCWGG | M.EcoBone4DcmP |
| 23450 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoBone4DcmP |
| 23455 | drug/metabolite exporter YedA | |||
| plasmid pBone4_5 | ||||
| 275 | DUF3927 family protein | |||
| 290 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoBone4ORF290P |
| 295 | TrmB family transcriptional regulator | |||
| 2550 | helix-turn-helix transcriptional regulator | |||
| 2555 | M | M.KpnYN1ORFGP (89% identity) | M.EcoBone4ORF2555P | |
| 2560 | 133 aa hypothetical protein | |||
| plasmid pBone4IncF | ||||
| 3855 | 102 aa hypothetical protein | |||
| 3860 | M | M.Kpn10553ORF29655P (98% identity) | M.EcoBone4ORF3860P | |
| 3865 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14235 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 14240 | R | EcosS9McrCP (100% identity) | EcoBone4McrCP | |
| 14245 | R | EcosS3McrBP (98% identity) | EcoBone4McrBP | |
| 14250 | glycosyltransferase family 2 protein | |||