Escherichia coli STO_Bone8 |
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Putative Escherichia coli STO_Bone8 RM systems
Ref: Li,F. et al. unpublished
REBASE ref # 33409
| Sequence length: | GenBank #: | |
| Chromosome: | 5,083,643 bp | CP054245 |
| plasmid pBone8IncF: | 132,547 bp | CP054247 |
REBASE acronym: EcoBone8
Org_num: 53930
All begin HRS07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17700 | endoribonuclease SymE | |||
| 17705 | R | Ecou021ORF19870P (100% identity) | EcoBone8ORF17715P | |
| ??? | S | S.Ecos9ORF22265P (20% identity) | S2.EcoBone8ORF17715P | |
| 17710 | S | S.Ecop4AORF21290P (81% identity) | S1.EcoBone8ORF17715P | |
| 17715 | M | M.Ecou021ORF19870P (100% identity) | M.EcoBone8ORF17715P | |
| 17720 | restriction endonuclease | |||
| 19510 | 156 aa hypothetical protein | |||
| 19515 | S | S3.EcoSME98ORF14850P (57% identity) | AAAGNNNNGTT | S.EcoBone8ORF19520P |
| 19520 | M | M.EcosS9ORF4930P (97% identity) | AAAGNNNNGTT | M.EcoBone8ORF19520P |
| 19525 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoBone8ORF19520P |
| 19530 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pBone8IncF | ||||
| 26215 | IS1 family transposase | |||
| 26220 | R | EcoBone7ORF26315P (99% identity) | CAAYNNNNNNCTGG | EcoBone8ORF26230P |
| 26225 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoBone8ORF26230P |
| 26230 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoBone8ORF26230P |
| 26235 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3545 | drug/metabolite exporter YedA | |||
| 3550 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoBone8DcmP |
| 3555 | M | M.Eco10863DcmP (95% identity) | CCWGG | M.EcoBone8DcmP |
| 3560 | phosphohydrolase | |||
| 6695 | PerC family transcriptional regulator | |||
| 6700 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoBone8ORF6700P |
| 6705 | DUF1382 family protein | |||
| 11105 | DNA-binding transcriptional regulator Fis | |||
| 11110 | M | M.EcoSCU479ORF6035P (100% identity) | ATGCAT | M.EcoBone8ORF11110P |
| 11115 | DUF2556 family protein | |||
| 13145 | cell division protein DamX | |||
| 13150 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoBone8DamP |
| 13155 | ribulose-phosphate 3-epimerase | |||
| 15485 | ead/Ea22-like family protein | |||
| 15490 | M | M.EcoS566ORF6865P (93% identity) | M.EcoBone8ORF15490P | |
| 15495 | Eae protein | |||
| 15550 | PerC family transcriptional regulator | |||
| 15555 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoBone8ORF15555P |
| 15560 | LexA family transcriptional regulator | |||
| 15590 | 67 aa hypothetical protein | |||
| 15595 | M | M.Sso63633ORF22290P (100% identity) | M.EcoBone8ORF15595P | |
| 15600 | phage lysis protein EssD | |||
| 22900 | 132 aa hypothetical protein | |||
| 22905 | M | M.KpnYN1ORFGP (89% identity) | M.EcoBone8ORF22905P | |
| 22910 | helix-turn-helix transcriptional regulator | |||
| 25220 | TrmB family transcriptional regulator | |||
| 25225 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoBone8ORF25225P |
| 25240 | DUF3927 family protein | |||
| plasmid pBone8IncF | ||||
| 26145 | 73 aa hypothetical protein | |||
| 26150 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoBone8ORF26150P |
| 26155 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17375 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 17380 | R | EcosS9McrCP (100% identity) | EcoBone8McrCP | |
| 17385 | R | EcosS3McrBP (100% identity) | EcoBone8McrBP | |
| 17390 | glycosyltransferase family 2 protein | |||