Escherichia coli STO_Bone7 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli STO_Bone7 RM systems
Ref: Li,F. et al. unpublished
REBASE ref # 33409
| Sequence length: | GenBank #: | |
| Chromosome: | 4,324,717 bp | CP054239 |
| plasmid pBone7_3: | 834,193 bp | CP054241 |
| plasmid pBone7IncF: | 134,442 bp | CP054243 |
REBASE acronym: EcoBone7
Org_num: 53929
All begin HRS08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21130 | type IV toxin-antitoxin system AbiEi family | |||
| 21135 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoBone7ORF21140P |
| 21140 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoBone7ORF21140P |
| 21145 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoBone7ORF21140P |
| 21150 | ash family protein | |||
| plasmid pBone7IncF | ||||
| 26300 | IS1 family transposase | |||
| 26305 | R | EcoBone8ORF26230P (99% identity) | CAAYNNNNNNCTGG | EcoBone7ORF26315P |
| 26310 | S | S.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | S.EcoBone7ORF26315P |
| 26315 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoBone7ORF26315P |
| 26320 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 100 | phage lysis protein EssD | |||
| 105 | M | M.Sso63633ORF22290P (100% identity) | M.EcoBone7ORF105P | |
| 110 | 67 aa hypothetical protein | |||
| 140 | LexA family transcriptional regulator | |||
| 145 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoBone7ORF145P |
| 150 | PerC family transcriptional regulator | |||
| 200 | Eae protein | |||
| 205 | M | M.EcoS566ORF6865P (100% identity) | M.EcoBone7ORF205P | |
| 210 | ead/Ea22-like family protein | |||
| 2555 | ribulose-phosphate 3-epimerase | |||
| 2560 | M | M.Eco10959DamP (93% identity) | M.EcoBone7DamP | |
| 2565 | cell division protein DamX | |||
| 4580 | DUF2556 family protein | |||
| 4585 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoBone7ORF4585P |
| 4590 | DNA-binding transcriptional regulator Fis | |||
| 8915 | DUF1382 family protein | |||
| 8920 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoBone7ORF8920P |
| 8925 | PerC family transcriptional regulator | |||
| 12005 | phosphohydrolase | |||
| 12010 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoBone7DcmP |
| 12015 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoBone7DcmP |
| 12020 | drug/metabolite exporter YedA | |||
| 15505 | DUF3927 family protein | |||
| 15520 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoBone7ORF15520P |
| 15525 | TrmB family transcriptional regulator | |||
| 17785 | helix-turn-helix transcriptional regulator | |||
| 17790 | M | M.KpnYN1ORFGP (89% identity) | M.EcoBone7ORF17790P | |
| 17795 | 71 aa hypothetical protein | |||
| plasmid pBone7_3 | ||||
| 21580 | phage lysis protein EssD | |||
| 21585 | M | M.Sso63633ORF22290P (100% identity) | M.EcoBone7ORF21585P | |
| 21590 | 67 aa hypothetical protein | |||
| 21625 | LexA family transcriptional regulator | |||
| 21630 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoBone7ORF21630P |
| 21635 | PerC family transcriptional regulator | |||
| 23830 | McrC family protein | |||
| 23835 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoBone7ORF23840P |
| 23840 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoBone7ORF23840P |
| 23845 | M | M2.EcosEC4ORF20110P (99% identity) | GGTCTC | M2.EcoBone7ORF23840P |
| 23850 | helix-turn-helix domain-containing protein | |||
| plasmid pBone7IncF | ||||
| 26235 | 73 aa hypothetical protein | |||
| 26240 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoBone7ORF26240P |
| 26245 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pBone7_3 | ||||
| 23820 | glycosyltransferase family 2 protein | |||
| 23825 | R | EcosS3McrBP (100% identity) | EcoBone7McrBP | |
| 23830 | R | EcosS9McrCP (100% identity) | EcoBone7McrCP | |
| 23835 | Alw26I/Eco31I/Esp3I family type II restriction | |||