Escherichia coli DOC14 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli DOC14 RM systems
Ref: Le,V.H. et al. unpublished
REBASE ref # 33371
Complete sequence: 4,630,639 bp
GenBank #: CP091065
REBASE acronym: EcoDOC14
Org_num: 53696
All begin L1123_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22180 | endoribonuclease SymE | |||
| 22185 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoDOC14ORF22190P |
| 22190 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoDOC14ORF22190P |
| 22195 | R | EcoW25113ORF11385P (100% identity) | AACNNNNNNGTGC | EcoDOC14ORF22190P |
| 22200 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16615 | DNA-binding transcriptional regulator Fis | |||
| 16620 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoDOC14ORF16620P |
| 16625 | DUF2556 family protein | |||
| 17240 | ribulose-phosphate 3-epimerase | |||
| 17245 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDOC14DamP |
| 17250 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12160 | isocitrate/isopropylmalate family dehydrogenase | |||
| 12165 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoDOC14ORF12165P |
| 12170 | site-specific DNA recombinase | |||
| 22165 | 978 aa hypothetical protein | |||
| 22170 | R | SenHNK130McrCP (100% identity) | EcoDOC14McrCP | |
| 22175 | R | SenHNK130McrBP (100% identity) | EcoDOC14McrBP | |
| 22180 | endoribonuclease SymE | |||
| 22195 | type I restriction-modification system | |||
| 22200 | R | SenHNK130MrrP (100% identity) | EcoDOC14MrrP | |
| 22205 | GTPase | |||