Rhodanobacter denitrificans FW104-MT042 |
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Putative Rhodanobacter denitrificans FW104-MT042 RM systems
Ref: Zhou,A. and Zhou,J. unpublished
REBASE ref # 33737
| Sequence length: | GenBank #: | |
| Chromosome: | 3,974,980 bp | CP088925 |
| plasmid unnamed: | 261,808 bp | CP088926 |
REBASE acronym: RdeMT042
Org_num: 55091
All begin LRK55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 320 | 164 aa hypothetical protein | |||
| 325 | R | RdePBS1ORF5950P (100% identity) | RdeMT042ORF340P | |
| 330 | 203 aa hypothetical protein | |||
| 335 | S | S.RdeR2ORF1482P (100% identity) | S.RdeMT042ORF340P | |
| 340 | M | M.RdeR2ORF1482P (100% identity) | M.RdeMT042ORF340P | |
| 345 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8860 | RNA pyrophosphohydrolase | |||
| 8870 | R | RthC33ORFFP (99% identity) | RdeMT042ORF8875P | |
| 8875 | M | M.RthC33ORFFP (100% identity) | M.RdeMT042ORF8875P | |
| 8880 | IS3 family transposase | |||
| 9030 | 420 aa hypothetical protein | |||
| 9035 | M | M.RthC33ORFGP (99% identity) | M.RdeMT042ORF9035P | |
| 9040 | V | V.RthC33ORFGP (57% identity) | V.RdeMT042ORF9035P | |
| 9045 | IS3 family transposase | |||
| 16075 | AAA family ATPase | |||
| 16080 | M | M.RdeR5ORF10390P (100% identity) | M.RdeMT042ORF16080P | |
| 16085 | 181 aa hypothetical protein | |||
| 17365 | EamA family transporter | |||
| 17370 | R | RdeR5ORF9560P (99% identity) | RdeMT042ORF17375P | |
| 17375 | M | M.RdeR5ORF9560P (99% identity) | M.RdeMT042ORF17375P | |
| 17380 | glycosyltransferase | |||
| plasmid unnamed | ||||
| 19180 | hemerythrin domain-containing protein | |||
| 19185 | RM | Xtr730ORF4915P (67% identity) | RdeMT042ORF19185P | |
| 19190 | 419 aa hypothetical protein | |||
| 19395 | 231 aa hypothetical protein | |||
| 19400 | M | M.RthR12ORF18970P (81% identity) | M.RdeMT042ORF19400P | |
| 19405 | RES family NAD+ phosphorylase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2590 | ComF family protein | |||
| 2595 | M | M.Rsp24678ORF7981P (71% identity) | M.RdeMT042ORF2595P | |
| 2600 | R | Rsp24678ORF7981P (99% identity) | RdeMT042ORF2595P | |
| 2605 | NERD domain-containing protein | |||
| 5040 | 148 aa hypothetical protein | |||
| 5045 | M | M.Rsp24678ORF8833P (76% identity) | M.RdeMT042ORF5045P | |
| 5050 | HigA family addiction module antitoxin | |||
| 5055 | type II toxin-antitoxin system RelE/ParE family | |||
| 5060 | R | Rsp24678ORF8833P (99% identity) | RdeMT042ORF5045P | |
| 5065 | APC family permease | |||
| 9510 | efflux RND transporter permease subunit | |||
| 9515 | R | CspSK3ORF65P (73% identity) | RdeMT042ORF9525P | |
| 9520 | Fic family protein | |||
| 9525 | M | M.Rsp115ORF18797P (82% identity) | M.RdeMT042ORF9525P | |
| 9530 | AAA family ATPase | |||