Rhodanobacter thiooxydans FW510-R12 |
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Putative Rhodanobacter thiooxydans FW510-R12 RM systems
Ref: Zhou,A. and Zhou,J. unpublished
REBASE ref # 33737
| Sequence length: | GenBank #: | |
| Chromosome: | 3,985,884 bp | CP088923 |
| plasmid unnamed: | 218,064 bp | CP088924 |
REBASE acronym: RthR12
Org_num: 55095
All begin LRK53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1055 | AAA family ATPase | |||
| 1060 | S | S.Atu441ORF13380P (41% identity) | S.RthR12ORF1065P | |
| 1065 | M | M.FspV12ORF16060P (96% identity) | M.RthR12ORF1065P | |
| 1070 | FRG domain-containing protein | |||
| 1075 | R | FspV12ORF16060P (91% identity) | RthR12ORF1065P | |
| 1085 | RNA polymerase sigma factor RpoD | |||
| 8635 | M48 family metallopeptidase | |||
| 8640 | R | Bps15237ORF20445P (50% identity) | RthR12ORF8655P | |
| 8645 | DUF3800 domain-containing protein | |||
| 8650 | S | S1.Psp2021ORF27490P (31% identity) | S.RthR12ORF8655P | |
| 8655 | M | M.MxaGH35ORF9095P (60% identity) | M.RthR12ORF8655P | |
| 8660 | YajG family lipoprotein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1970 | integrase arm-type DNA-binding domain-containing | |||
| 1975 | M | M.Xca552ORF15430P (90% identity) | M.RthR12ORF1975P | |
| 1980 | V | V.Bhi711ORF505P (65% identity) | V.RthR12ORF1975P | |
| 1985 | DISARM system SNF2-like helicase DrmD | |||
| 1985 | DISARM system SNF2-like helicase DrmD | |||
| 1990 | RM | Xca552ORF15415P (67% identity) | RthR12ORF1990P | |
| 1995 | ATP-binding protein | |||
| 17650 | helix-turn-helix domain-containing protein | |||
| 17655 | C | C.Lfe12022ORF1448P (48% identity) | C.RthR12ORF17695P | |
| 17660 | zeta toxin family protein | |||
| 17665 | type II toxin-antitoxin system Phd/YefM family | |||
| 17670 | 107 aa hypothetical protein | |||
| 17675 | DUF2798 domain-containing protein | |||
| 17680 | 302 aa hypothetical protein | |||
| 17685 | IS200/IS605 family transposase | |||
| 17690 | 141 aa hypothetical protein | |||
| 17695 | M | M.MspTY81ORF53070P (60% identity) | M.RthR12ORF17695P | |
| 17700 | R | MspSCORF22125P (61% identity) | RthR12ORF17695P | |
| 17705 | NrdJb | |||
| plasmid unnamed | ||||
| 18965 | 232 aa hypothetical protein | |||
| 18970 | M | M.RdeMT042ORF19400P (81% identity) | M.RthR12ORF18970P | |
| 18975 | 91 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4730 | APC family permease | |||
| 4735 | R | RthC33ORFCP (93% identity) | RthR12ORF4740P | |
| 4740 | M | M.RdeR5ORF3230P (89% identity) | M.RthR12ORF4740P | |
| 4745 | 149 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1045 | TniQ family protein | |||
| 1050 | R | FspV12McrCP (84% identity) | RthR12McrCP | |
| 1055 | R | FspV12McrBP (90% identity) | RthR12McrBP | |
| 1060 | restriction endonuclease subunit S | |||