Escherichia coli STEC346 |
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Putative Escherichia coli STEC346 RM systems
Ref: Yang,X. et al. Pathogens 10 (12), 1551 (2021)
REBASE ref # 33262
| Sequence length: | GenBank #: | |
| Chromosome: | 5,104,329 bp | CP091044 |
| plasmid p1_STEC346: | 63,171 bp | CP091045 |
| plasmid p2_STEC346: | 79,133 bp | CP091046 |
| plasmid p3_STEC346: | 82,263 bp | CP091047 |
REBASE acronym: EcoSTEC346
Org_num: 53903
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.EcoR70ORF600P (100% identity) | AGCANNNNNNNTAG | M.EcoSTEC346ORFGP |
| ??? | S | S.EcoTX1999ORF2159P (100% identity) | AGCANNNNNNNTAG | S.EcoSTEC346ORFGP |
| ??? | R | EcoTX1999ORF2159P (100% identity) | AGCANNNNNNNTAG | EcoSTEC346ORFGP |
| ??? | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoSTEC346ORFLP |
| ??? | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoSTEC346ORFLP |
| ??? | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.EcoSTEC346ORFLP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoSTEC346ORFCP |
| ??? | M | M.EcoTCM3e1ORF6790P (99% identity) | M.EcoSTEC346ORFFP | |
| ??? | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoSTEC346DcmP |
| ??? | V | V.EcoS1632DcmP (100% identity) | V.EcoSTEC346DcmP | |
| ??? | M | M.EcoSTEC173ORF13780P (100% identity) | M.EcoSTEC346ORFHP | |
| ??? | M | M.EcoVA1ORFBP (100% identity) | GATC | M.EcoSTEC346ORFKP |
| ??? | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoSTEC346ORFMP |
| ??? | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoSTEC346ORFMP |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoSTEC346ORFMP |
| plasmid p1_STEC346 | ||||
| ??? | M | M.Sen527ORF25750P (100% identity) | M.EcoSTEC346ORFAP | |
| plasmid p2_STEC346 | ||||
| ??? | M | M.SdyFF51ORF24515P (100% identity) | M.EcoSTEC346ORFBP | |
| plasmid p3_STEC346 | ||||
| ??? | M | M.Sen527ORF25750P (100% identity) | M.EcoSTEC346ORFDP | |
| ??? | M | M.UbapDS2ORFAP (100% identity) | CCWGG | M.EcoSTEC346ORFEP |
| ??? | R | YpsR2ORFAP (44% identity) | CCWGG | EcoSTEC346ORFEP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | Ssp28760MrrP (100% identity) | EcoSTEC346MrrP | |
| ??? | R | EcoJA37McrBP (100% identity) | EcoSTEC346McrBP | |
| ??? | R | Ssp28760McrCP (96% identity) | EcoSTEC346McrCP | |
| ??? | R | EcosS3McrBP (100% identity) | EcoSTEC346McrB2P | |
| ??? | R | EcosS9McrCP (100% identity) | EcoSTEC346McrC2P | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.EcoSTEC346ORFJP (100% identity) | GATC | M.EcoSTEC346ORFIP |
| ??? | M | M.EcoSTEC346ORFIP (100% identity) | GATC | M.EcoSTEC346ORFJP |