Lactobacillus gasseri 2016 |
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Putative Lactobacillus gasseri 2016 RM systems
Ref: Karlyshev,A.V. et al. Genome Announc 1 (4), e00624-13 (2013)
REBASE ref # 16397
Complete sequence: 1,866,966 bp
GenBank #: CP090409
REBASE acronym: Lga2016
Org_num: 11212
All begin M497_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4155 | 296 aa hypothetical protein | |||
| 4160 | M | M.LgrVSI07ORF3855P (100% identity) | M.Lga2016ORF6540P | |
| 4165 | S | S1.LgrVSI07ORF3855P (100% identity) | S1.Lga2016ORF6540P | |
| 4170 | tyrosine-type recombinase/integrase | |||
| 4175 | S | S2.LgrVSI07ORF3855P (99% identity) | S2.Lga2016ORF6540P | |
| 4180 | R | LgrVSI07ORF3855P (99% identity) | Lga2016ORF6540P | |
| 4185 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7015 | P27 family phage terminase small subunit | |||
| 7020 | M | M.LgaVSI26ORF7025P (100% identity) | M.Lga2016ORF9455P | |
| 7025 | 206 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6915 | 430 aa hypothetical protein | |||
| 6920 | R | LgaVSI26ORF6925P (100% identity) | Lga2016ORF9360P | |
| 6925 | M | M.LgaVSI26ORF6925P (99% identity) | M.Lga2016ORF9360P | |
| 6930 | C | C.LgaVSI26ORF6925P (100% identity) | C.Lga2016ORF9360P | |
| 6935 | DUF2326 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 170 | exodeoxyribonuclease III | |||
| 175 | R | LgrVSI07ORF180P (99% identity) | Lga2016ORF1785P | |
| 180 | alpha/beta hydrolase | |||