Escherichia coli 1162C |
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Putative Escherichia coli 1162C RM systems
Ref: Cevallos,M.A. et al. unpublished
REBASE ref # 33265
Complete sequence: 5,048,620 bp
GenBank #: CP051659
REBASE acronym: Eco1162C
Org_num: 53258
All begin HH202_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 890 | endoribonuclease SymE | |||
| 895 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco1162CORF905P |
| 900 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco1162CORF905P |
| 905 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco1162CORF905P |
| 910 | restriction endonuclease | |||
| 2695 | ash family protein | |||
| 2700 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco1162CORF2705P |
| 2705 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco1162CORF2705P |
| 2710 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco1162CORF2705P |
| 2715 | 267 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 545 | helix-turn-helix domain-containing protein | |||
| 550 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco1162CORF550P |
| 555 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco1162CORF550P |
| 560 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1162CORF550P |
| 565 | McrC family protein | |||
| 6475 | 71 aa hypothetical protein | |||
| 6480 | M | M.KpnYN1ORFGP (89% identity) | M.Eco1162CORF6480P | |
| 6485 | helix-turn-helix transcriptional regulator | |||
| 8725 | TrmB family transcriptional regulator | |||
| 8730 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco1162CORF8730P |
| 8745 | DUF3927 family protein | |||
| 12205 | drug/metabolite exporter YedA | |||
| 12210 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco1162CDcmP |
| 12215 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco1162CDcmP |
| 12220 | phosphohydrolase | |||
| 19310 | DNA-binding transcriptional regulator Fis | |||
| 19315 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1162CORF19315P |
| 19320 | DUF2556 family protein | |||
| 19910 | ribulose-phosphate 3-epimerase | |||
| 19915 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1162CDamP |
| 19920 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 560 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 565 | R | EcosS9McrCP (100% identity) | Eco1162CMcrCP | |
| 570 | R | EcosS3McrBP (100% identity) | Eco1162CMcrBP | |
| 575 | glycosyltransferase family 2 protein | |||