Salmonella enterica 2016062-SE |
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Putative Salmonella enterica 2016062-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
| Sequence length: | GenBank #: | |
| Chromosome: | 4,982,119 bp | CP090539 |
| plasmid p2016062-242: | 242,063 bp | CP090540 |
REBASE acronym: Sen62SE
Org_num: 55138
All begin L0F59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20660 | restriction endonuclease | |||
| 20665 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen62SEORF20670P |
| 20670 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen62SEORF20670P |
| 20675 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen62SEORF20670P |
| 20680 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.Sen62SEDamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 3225 | DUF2732 domain-containing protein | |||
| 3230 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen62SEORF3230P |
| 3235 | replication endonuclease | |||
| 6225 | thermonuclease family protein | |||
| 6230 | M | M.StyCORF187P (49% identity) | M.Sen62SEORF6230P | |
| 6235 | IS6-like element IS26 family transposase | |||
| 6625 | ead/Ea22-like family protein | |||
| 6630 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen62SEORF6630P |
| 6635 | DUF551 domain-containing protein | |||
| 9965 | PerC family transcriptional regulator | |||
| 9970 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen62SEORF9970P |
| 9975 | RusA family crossover junction | |||
| 10220 | phosphohydrolase | |||
| 10225 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen62SEDcmP |
| 10230 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen62SEDcmP |
| 10235 | drug/metabolite exporter YedA | |||
| 20820 | BREX system P-loop protein BrxC | |||
| 20825 | RM | StyUK1IV (100% identity) | GATCAG | Sen62SEORF20825P |
| 20830 | AAA family ATPase | |||
| 22305 | LexA family transcriptional regulator | |||
| 22310 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen62SEORF22310P |
| 22315 | PerC family transcriptional regulator | |||
| plasmid p2016062-242 | ||||
| 24885 | 55 aa hypothetical protein | |||
| 24890 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen62SEORF24890P |
| 24895 | thermonuclease family protein | |||
| 25560 | 48 aa hypothetical protein | |||
| 25565 | M | M.YpsF1ORFBP (100% identity) | M.Sen62SEORF25565P | |
| 25570 | 202 aa hypothetical protein | |||
| 25685 | DNA-binding protein | |||
| 25690 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen62SEORF25690P |
| 25695 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18355 | small effector SsaA | |||
| 18360 | R | StyUK1IP (99% identity) | CAGAG | Sen62SEORF18365P |
| 18365 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen62SEORF18365P |
| 18370 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20655 | BrnT family toxin | |||
| 20660 | R | StyUK1MrrP (100% identity) | Sen62SEMrrP | |
| 20665 | type I restriction-modification system | |||