Salmonella enterica 2016089-SE |
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Putative Salmonella enterica 2016089-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
| Sequence length: | GenBank #: | |
| Chromosome: | 4,955,735 bp | CP090535 |
| plasmid p2016089-170: | 170,071 bp | CP090536 |
| plasmid p3: | 90,380 bp | CP090538 |
REBASE acronym: Sen89SE
Org_num: 55139
All begin L0F58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20255 | restriction endonuclease | |||
| 20260 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen89SEORF20265P |
| 20265 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen89SEORF20265P |
| 20270 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen89SEORF20265P |
| 20275 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen89SEDamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 3230 | DUF2732 domain-containing protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen89SEORF3235P |
| 3240 | replication endonuclease | |||
| 3725 | thermonuclease family protein | |||
| 3730 | M | M.StyCORF187P (49% identity) | M.Sen89SEORF3730P | |
| 3735 | IS6-like element IS26 family transposase | |||
| 6215 | ead/Ea22-like family protein | |||
| 6220 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen89SEORF6220P |
| 6225 | DUF551 domain-containing protein | |||
| 9550 | PerC family transcriptional regulator | |||
| 9555 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen89SEORF9555P |
| 9560 | RusA family crossover junction | |||
| 9805 | phosphohydrolase | |||
| 9810 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen89SEDcmP |
| 9815 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen89SEDcmP |
| 9820 | drug/metabolite exporter YedA | |||
| 20415 | BREX system P-loop protein BrxC | |||
| 20420 | RM | StyUK1IV (100% identity) | GATCAG | Sen89SEORF20420P |
| 20425 | AAA family ATPase | |||
| plasmid p2016089-170 | ||||
| 24645 | 55 aa hypothetical protein | |||
| 24650 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen89SEORF24650P |
| 24655 | thermonuclease family protein | |||
| 24980 | DNA-binding protein | |||
| 24985 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen89SEORF24985P |
| 24990 | 277 aa hypothetical protein | |||
| plasmid p3 | ||||
| 25255 | 73 aa hypothetical protein | |||
| 25260 | M | M.SsoST152ORF25555P (100% identity) | M.Sen89SEORF25260P | |
| 25265 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17945 | small effector SsaA | |||
| 17950 | R | StyUK1IP (99% identity) | CAGAG | Sen89SEORF17955P |
| 17955 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen89SEORF17955P |
| 17960 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20250 | BrnT family toxin | |||
| 20255 | R | StyUK1MrrP (100% identity) | Sen89SEMrrP | |
| 20260 | type I restriction-modification system | |||