Salmonella enterica 2017005-SE |
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Putative Salmonella enterica 2017005-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
| Sequence length: | GenBank #: | |
| Chromosome: | 5,019,610 bp | CP090533 |
| plasmid p2017005-292: | 292,358 bp | CP090534 |
REBASE acronym: Sen05SE
Org_num: 55140
All begin L0F61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2820 | endoribonuclease SymE | |||
| 2825 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen05SEORF2830P |
| 2830 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen05SEORF2830P |
| 2835 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen05SEORF2830P |
| 2840 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | replication endonuclease | |||
| 15 | M | M.SflFF38ORF15P (100% identity) | GGCC | M.Sen05SEORF15P |
| 20 | 330 aa hypothetical protein | |||
| 1185 | PerC family transcriptional regulator | |||
| 1190 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen05SEORF1190P |
| 1195 | LexA family transcriptional regulator | |||
| 2670 | AAA family ATPase | |||
| 2675 | RM | StyUK1IV (100% identity) | GATCAG | Sen05SEORF2675P |
| 2680 | BREX system P-loop protein BrxC | |||
| 4935 | PerC family transcriptional regulator | |||
| 4940 | M | M.Sens418ORF4945P (100% identity) | GATC | M.Sen05SEORF4940P |
| 4945 | LexA family transcriptional regulator | |||
| 4970 | 92 aa hypothetical protein | |||
| 4975 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen05SEORF4975P | |
| 4980 | phage holin, lambda family | |||
| 13580 | drug/metabolite exporter YedA | |||
| 13585 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen05SEDcmP |
| 13590 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen05SEDcmP |
| 13595 | phosphohydrolase | |||
| 13840 | RusA family crossover junction | |||
| 13845 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen05SEORF13845P |
| 13850 | PerC family transcriptional regulator | |||
| 17180 | DUF551 domain-containing protein | |||
| 17185 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen05SEORF17185P |
| 17190 | ead/Ea22-like family protein | |||
| 17580 | IS6-like element IS26 family transposase | |||
| 17585 | M | M.StyCORF187P (49% identity) | M.Sen05SEORF17585P | |
| 17590 | thermonuclease family protein | |||
| 21775 | ribulose-phosphate 3-epimerase | |||
| 21780 | M | M.StyTDamP (100% identity) | GATC | M.Sen05SEDamP |
| 21785 | cell division protein DamX | |||
| plasmid p2017005-292 | ||||
| 25590 | 55 aa hypothetical protein | |||
| 25595 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen05SEORF25595P |
| 25600 | thermonuclease family protein | |||
| 26125 | 48 aa hypothetical protein | |||
| 26130 | M | M.YpsF1ORFBP (100% identity) | M.Sen05SEORF26130P | |
| 26135 | 202 aa hypothetical protein | |||
| 26245 | DNA-binding protein | |||
| 26250 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen05SEORF26250P |
| 26255 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5430 | MFS transporter | |||
| 5435 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen05SEORF5435P |
| 5440 | R | StyUK1IP (99% identity) | CAGAG | Sen05SEORF5435P |
| 5445 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2835 | type I restriction-modification system | |||
| 2840 | R | StyUK1MrrP (100% identity) | Sen05SEMrrP | |
| 2845 | BrnT family toxin | |||