Salmonella enterica 2008079-SE |
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Putative Salmonella enterica 2008079-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
| Sequence length: | GenBank #: | |
| Chromosome: | 4,976,978 bp | CP090529 |
| plasmid p2008079-241: | 241,424 bp | CP090530 |
| plasmid p3: | 93,407 bp | CP090532 |
REBASE acronym: Sen79SE
Org_num: 55136
All begin L0F60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20385 | restriction endonuclease | |||
| 20390 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen79SEORF20395P |
| 20395 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen79SEORF20395P |
| 20400 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen79SEORF20395P |
| 20405 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | cell division protein DamX | |||
| 1810 | M | M.StyTDamP (100% identity) | GATC | M.Sen79SEDamP |
| 1815 | ribulose-phosphate 3-epimerase | |||
| 3220 | DUF2732 domain-containing protein | |||
| 3225 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen79SEORF3225P |
| 3230 | replication endonuclease | |||
| 5615 | IS6-like element IS26 family transposase | |||
| 5620 | M | M.StyCORF187P (49% identity) | M.Sen79SEORF5620P | |
| 5625 | thermonuclease family protein | |||
| 6320 | ead/Ea22-like family protein | |||
| 6325 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen79SEORF6325P |
| 6330 | DUF551 domain-containing protein | |||
| 9660 | PerC family transcriptional regulator | |||
| 9665 | M | M.SenPS1ORF9505P (100% identity) | M.Sen79SEORF9665P | |
| 9670 | RusA family crossover junction | |||
| 9915 | phosphohydrolase | |||
| 9920 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen79SEDcmP |
| 9925 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen79SEDcmP |
| 9930 | drug/metabolite exporter YedA | |||
| 20545 | BREX system P-loop protein BrxC | |||
| 20550 | RM | StyUK1IV (100% identity) | GATCAG | Sen79SEORF20550P |
| 20555 | AAA family ATPase | |||
| plasmid p2008079-241 | ||||
| 24775 | 55 aa hypothetical protein | |||
| 24780 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen79SEORF24780P |
| 24785 | thermonuclease family protein | |||
| 25430 | 48 aa hypothetical protein | |||
| 25435 | M | M.YpsF1ORFBP (100% identity) | M.Sen79SEORF25435P | |
| 25440 | 202 aa hypothetical protein | |||
| 25550 | DNA-binding protein | |||
| 25555 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen79SEORF25555P |
| 25560 | 277 aa hypothetical protein | |||
| plasmid p3 | ||||
| 25910 | 73 aa hypothetical protein | |||
| 25915 | M | M.SspPIBORF23080P (100% identity) | M.Sen79SEORF25915P | |
| 25920 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18080 | small effector SsaA | |||
| 18085 | R | StyUK1IP (99% identity) | CAGAG | Sen79SEORF18090P |
| 18090 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen79SEORF18090P |
| 18095 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20380 | BrnT family toxin | |||
| 20385 | R | StyUK1MrrP (100% identity) | Sen79SEMrrP | |
| 20390 | type I restriction-modification system | |||