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Putative Salmonella enterica 2017028-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
Sequence length: | GenBank #: | |
Chromosome: | 5,019,931 bp | CP090545 |
plasmid p2017028-250: | 250,700 bp | CP090546 |
REBASE acronym: Sen28SE
Org_num: 55141
All begin L0F57_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20930 | restriction endonuclease | |||
20935 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen28SEORF20940P |
20940 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen28SEORF20940P |
20945 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen28SEORF20940P |
20950 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1805 | cell division protein DamX | |||
1810 | M | M.StyTDamP (100% identity) | GATC | M.Sen28SEDamP |
1815 | ribulose-phosphate 3-epimerase | |||
3220 | DUF2732 domain-containing protein | |||
3225 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen28SEORF3225P |
3230 | replication endonuclease | |||
6195 | thermonuclease family protein | |||
6200 | M | M.StyCORF187P (49% identity) | M.Sen28SEORF6200P | |
6205 | IS6-like element IS26 family transposase | |||
6595 | ead/Ea22-like family protein | |||
6600 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen28SEORF6600P |
6605 | DUF551 domain-containing protein | |||
9930 | PerC family transcriptional regulator | |||
9935 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen28SEORF9935P |
9940 | RusA family crossover junction | |||
10185 | phosphohydrolase | |||
10190 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen28SEDcmP |
10195 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen28SEDcmP |
10200 | drug/metabolite exporter YedA | |||
18790 | phage holin, lambda family | |||
18795 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen28SEORF18795P | |
18800 | 92 aa hypothetical protein | |||
18825 | LexA family transcriptional regulator | |||
18830 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Sen28SEORF18830P |
18835 | PerC family transcriptional regulator | |||
21090 | BREX system P-loop protein BrxC | |||
21095 | RM | StyUK1IV (100% identity) | GATCAG | Sen28SEORF21095P |
21100 | AAA family ATPase | |||
22585 | LexA family transcriptional regulator | |||
22590 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen28SEORF22590P |
22595 | PerC family transcriptional regulator | |||
plasmid p2017028-250 | ||||
25165 | 55 aa hypothetical protein | |||
25170 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen28SEORF25170P |
25175 | thermonuclease family protein | |||
25895 | 48 aa hypothetical protein | |||
25900 | M | M.YpsF1ORFBP (100% identity) | M.Sen28SEORF25900P | |
25905 | 202 aa hypothetical protein | |||
26010 | DNA-binding protein | |||
26015 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen28SEORF26015P |
26020 | 277 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18320 | small effector SsaA | |||
18325 | R | StyUK1IP (99% identity) | CAGAG | Sen28SEORF18330P |
18330 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen28SEORF18330P |
18335 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20925 | BrnT family toxin | |||
20930 | R | StyUK1MrrP (100% identity) | Sen28SEMrrP | |
20935 | type I restriction-modification system |