Escherichia coli STEC1012 |
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Putative Escherichia coli STEC1012 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
| Sequence length: | GenBank #: | |
| Chromosome: | 4,191,005 bp | CP061269 |
| plasmid pSTEC1012_1: | 1,204,529 bp | CP061270 |
| plasmid pSTEC1012_2: | 70,870 bp | CP061271 |
REBASE acronym: EcoSTEC1012
Org_num: 53893
All begin H6S07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15575 | GTPase family protein | |||
| 15580 | M | M.Eco41C14ORF20990P (99% identity) | M.EcoSTEC1012ORF15580P | |
| 15585 | S | S.Ecos67ORF22160P (89% identity) | S.EcoSTEC1012ORF15580P | |
| 15590 | R | Eco4090ORF17825P (98% identity) | EcoSTEC1012ORF15580P | |
| 15595 | 105 aa hypothetical protein | |||
| 15765 | EF-P beta-lysylation protein EpmB | |||
| 15770 | M | M.Sen8497ORF2259P (100% identity) | M.EcoSTEC1012ORF15770P | |
| 15775 | Rpn family recombination-promoting | |||
| plasmid pSTEC1012_1 | ||||
| 21005 | toprim domain-containing protein | |||
| 21010 | R | SsoSE61ORF6540P (97% identity) | GACNNNNNNRTAAY | EcoSTEC1012ORF21020P |
| 21015 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.EcoSTEC1012ORF21020P |
| 21020 | M | M.SsoSE61ORF6540P (99% identity) | GACNNNNNNRTAAY | M.EcoSTEC1012ORF21020P |
| 21025 | DUF4942 domain-containing protein | |||
| 22970 | M48 family metallopeptidase | |||
| 22975 | R | EcoMS1718ORF18880P (100% identity) | YTCANNNNNNGTTY | EcoSTEC1012ORF22995P |
| 22980 | macro domain-containing protein | |||
| 22985 | DUF4433 domain-containing protein | |||
| 22990 | S | S.EcoMS1718ORF18880P (99% identity) | YTCANNNNNNGTTY | S.EcoSTEC1012ORF22995P |
| 22995 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoSTEC1012ORF22995P |
| 23000 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2220 | DUF2556 family protein | |||
| 2225 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSTEC1012ORF2225P |
| 2230 | DNA-binding transcriptional regulator Fis | |||
| 9925 | phosphohydrolase | |||
| 9930 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.EcoSTEC1012DcmP |
| 9935 | V | V.Ecos53DcmP (100% identity) | V.EcoSTEC1012DcmP | |
| 9940 | drug/metabolite exporter YedA | |||
| 11865 | NinE family protein | |||
| 11870 | M | M.Ecos15955ORF20860P (100% identity) | M.EcoSTEC1012ORF11870P | |
| 11875 | protein ninF | |||
| 14840 | SAM-dependent DNA methyltransferase | |||
| 14860 | M | M.Eco007ORF22900P (78% identity) | M.EcoSTEC1012ORF14860P | |
| 14865 | TrmB family transcriptional regulator | |||
| plasmid pSTEC1012_2 | ||||
| 26460 | 73 aa hypothetical protein | |||
| 26465 | M | M.EcoSTEC405ORF25310P (100% identity) | SAY | M.EcoSTEC1012ORF26465P |
| 26470 | 103 aa hypothetical protein | |||