Escherichia coli STEC1024 |
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Putative Escherichia coli STEC1024 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
| Sequence length: | GenBank #: | |
| Chromosome: | 5,018,257 bp | CP061264 |
| plasmid pSTEC1024_1: | 149,110 bp | CP061265 |
| plasmid pSTEC1024_2: | 168,406 bp | CP061266 |
REBASE acronym: EcoSTEC1014
Org_num: 53894
All begin H6S08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21860 | DUF4942 domain-containing protein | |||
| 21865 | M | M.Ecos4422ORF22930P (100% identity) | M.EcoSTEC1014ORF21865P | |
| 21870 | S | S.Ecos4422ORF22930P (100% identity) | S.EcoSTEC1014ORF21865P | |
| 21875 | R | Ecos4422ORF22930P (99% identity) | EcoSTEC1014ORF21865P | |
| 21885 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1780 | cell division protein DamX | |||
| 1785 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSTEC1014DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2335 | DUF2556 family protein | |||
| 2340 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoSTEC1014ORF2340P |
| 2345 | DNA-binding transcriptional regulator Fis | |||
| 6300 | 257 aa hypothetical protein | |||
| 6305 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoSTEC1014ORF6305P | |
| 6310 | R | Sso8033ORF3755P (100% identity) | CCWGG | EcoSTEC1014ORF6305P |
| 6315 | 121 aa hypothetical protein | |||
| 7945 | DUF1382 family protein | |||
| 7950 | M | M.EspP079ORF2847P (100% identity) | GATC | M.EcoSTEC1014ORF7950P |
| 7955 | regulator | |||
| 10115 | phosphohydrolase | |||
| 10120 | M | M.SflSTLE1DcmP (99% identity) | CCWGG | M.EcoSTEC1014DcmP |
| 10125 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoSTEC1014DcmP |
| 10130 | drug/metabolite exporter YedA | |||
| 10710 | TrmB family transcriptional regulator | |||
| 10715 | M | M.EcoSTEC636ORF9825P (100% identity) | M.EcoSTEC1014ORF10715P | |
| 10735 | DUF1737 domain-containing protein | |||
| 14395 | DUF1737 domain-containing protein | |||
| 14400 | M | M.Eco3665ORFIP (99% identity) | M.EcoSTEC1014ORF14400P | |
| 14405 | TrmB family transcriptional regulator | |||
| 16140 | replication endonuclease | |||
| 16145 | M | M.EcoPSJ12ORF13470P (99% identity) | GATC | M.EcoSTEC1014ORF16145P |
| 16150 | TraR/DksA family transcriptional regulator | |||
| 17885 | phage lysis protein EssD | |||
| 17890 | M | M.Sso63633ORF22290P (100% identity) | M.EcoSTEC1014ORF6110P | |
| 17895 | 67 aa hypothetical protein | |||
| plasmid pSTEC1024_1 | ||||
| 25325 | IS6-like element IS26 family transposase | |||
| 25330 | M | M.YpsF1ORFBP (73% identity) | M.EcoSTEC1014ORF25330P | |
| 25335 | 202 aa hypothetical protein | |||
| 25445 | DNA-binding protein | |||
| 25450 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoSTEC1014ORF25450P |
| 25455 | 284 aa hypothetical protein | |||
| plasmid pSTEC1024_2 | ||||
| 25870 | 73 aa hypothetical protein | |||
| 25875 | M | M.EcoSTEC639ORF28210P (90% identity) | M.EcoSTEC1014ORF25875P | |
| 25880 | IS110 family transposase | |||
| 26520 | 72 aa hypothetical protein | |||
| 26525 | M | M.Eco3665ORFLP (89% identity) | M.EcoSTEC1014ORF26525P | |
| 26530 | IS110-like element ISShdy1 family transposase | |||