Escherichia coli STEC411 |
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Putative Escherichia coli STEC411 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
| Sequence length: | GenBank #: | |
| Chromosome: | 4,177,409 bp | CP061243 |
| plasmid pSTEC411_1: | 1,412,998 bp | CP061244 |
| plasmid pSTEC411_2: | 90,602 bp | CP061245 |
| plasmid pSTEC411_3: | 94,633 bp | CP061246 |
REBASE acronym: EcoSTEC411
Org_num: 53913
All begin H6S20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3440 | endoribonuclease SymE | |||
| 3445 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.EcoSTEC411ORF3450P |
| 3450 | M | M.EcoSTEC508ORF24455P (99% identity) | TACNNNNNNNRTRTC | M.EcoSTEC411ORF3450P |
| 3455 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | EcoSTEC411ORF3450P |
| 3460 | 146 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14850 | LexA family transcriptional regulator | |||
| 14855 | M | M.EcoSO179ORF29165P (100% identity) | GATC | M.EcoSTEC411ORF14855P |
| 14860 | PerC family transcriptional regulator | |||
| 18280 | DNA-binding transcriptional regulator Fis | |||
| 18285 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSTEC411ORF18285P |
| 18290 | DUF2556 family protein | |||
| 18840 | ribulose-phosphate 3-epimerase | |||
| 18845 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSTEC411DamP |
| 18850 | cell division protein DamX | |||
| plasmid pSTEC411_1 | ||||
| 23835 | drug/metabolite exporter YedA | |||
| 23840 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoSTEC411DcmP |
| 23845 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoSTEC411DcmP |
| 23850 | HD domain-containing protein | |||
| 25950 | 590 aa hypothetical protein | |||
| ??? | M | M.EcoSTEC416ORF20240P (100% identity) | GATC | M.EcoSTEC411ORF25955P |
| 25965 | recombination protein NinB | |||
| plasmid pSTEC411_2 | ||||
| 29090 | recombination protein NinB | |||
| 29095 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoSTEC411ORF29095P |
| 29100 | NinE family protein | |||
| plasmid pSTEC411_3 | ||||
| 29325 | 72 aa hypothetical protein | |||
| 29330 | M | M.EcopO26ORF185P (100% identity) | SAY | M.EcoSTEC411ORF29330P |
| 29335 | 103 aa hypothetical protein | |||