Escherichia coli STEC416 |
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Putative Escherichia coli STEC416 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
Complete sequence: 5,714,219 bp
GenBank #: CP061241
REBASE acronym: EcoSTEC416
Org_num: 53915
All begin H6S22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3700 | endoribonuclease SymE | |||
| 3705 | S | S.EcoSTEC508ORF24455P (99% identity) | TACNNNNNNNRTRTC | S.EcoSTEC416ORF3710P |
| 3710 | M | M.EcoSTEC508ORF24455P (95% identity) | TACNNNNNNNRTRTC | M.EcoSTEC416ORF3710P |
| 3715 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | EcoSTEC416ORF3710P |
| 3720 | 322 aa hypothetical protein | |||
| 10750 | M48 family metallopeptidase | |||
| 10755 | R | PmeBin330ORFCP (99% identity) | EcoSTEC416ORF10780P | |
| 10760 | macro domain-containing protein | |||
| 10765 | DUF4433 domain-containing protein | |||
| 10770 | S | S.Eco86ECORFAP (62% identity) | S2.EcoSTEC416ORF10780P | |
| 10775 | S | S.EcosB2CORFEP (40% identity) | S1.EcoSTEC416ORF10780P | |
| 10780 | M | M.EcosB2CORFEP (99% identity) | M.EcoSTEC416ORF10780P | |
| 10785 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10060 | HNH endonuclease | |||
| 10065 | M | M.Esp9308ORFFP (72% identity) | GATC | M.EcoSTEC416ORF10065P |
| 10070 | NinE family protein | |||
| 17650 | drug/metabolite exporter YedA | |||
| 17655 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoSTEC416DcmP |
| 17660 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoSTEC416DcmP |
| 17665 | HD domain-containing protein | |||
| 20235 | 590 aa hypothetical protein | |||
| ??? | M | M.EcoSTEC411ORF25955P (100% identity) | GATC | M.EcoSTEC416ORF20240P |
| 20250 | recombination protein NinB | |||
| 22945 | LexA family transcriptional regulator | |||
| 22950 | M | M.EcoSTEC508ORF5750P (72% identity) | M.EcoSTEC416ORF22950P | |
| 22955 | PerC family transcriptional regulator | |||
| 26665 | DNA-binding transcriptional regulator Fis | |||
| 26670 | M | M.Eco4ACSF109ORF16745P (100% identity) | ATGCAT | M.EcoSTEC416ORF26670P |
| 26675 | DUF2556 family protein | |||
| 27230 | ribulose-phosphate 3-epimerase | |||
| 27235 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSTEC416DamP |
| 27240 | cell division protein DamX | |||