Xanthomonas campestris pv. campestris SB80 |
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Putative Xanthomonas campestris pv. campestris SB80 RM systems
Ref: Erken,S. et al. unpublished
REBASE ref # 33954
Complete sequence: 5,129,762 bp
GenBank #: CP089952
REBASE acronym: XcaSB80
Org_num: 56063
All begin LR085_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6030 | M48 family metallopeptidase | |||
| 6035 | R | XcaXY11ORF6160P (100% identity) | CAAGNNNNNCTTA | XcaSB80ORF6055P |
| 6040 | S | S2.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | S.XcaSB80ORF6055P |
| 6045 | virulence RhuM family protein | |||
| 6050 | damage-inducible protein D | |||
| 6055 | M | M.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | M.XcaSB80ORF6055P |
| 6060 | restriction endonuclease subunit S | |||
| 16495 | 98 aa hypothetical protein | |||
| 16500 | R | Xca9145ORF16775P (100% identity) | XcaSB80ORF16515P | |
| 16505 | S | S.XcaTJORFEP (100% identity) | S.XcaSB80ORF16515P | |
| 16510 | virulence RhuM family protein | |||
| 16515 | M | M.XcaC7ORF16935P (49% identity) | M.XcaSB80ORF16515BP | |
| 16520 | M | M.XcaTJORFEP (45% identity) | M.XcaSB80ORF16515AP | |
| 16525 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2985 | IS3-like element IS1404 family transposase | |||
| 2990 | R | XcaYORFAP (100% identity) | XcaSB80ORF2990P | |
| 2995 | 90 aa hypothetical protein | |||
| 10570 | AAA family ATPase | |||
| 10575 | M | M.XcaYORFEP (48% identity) | M.XcaSB80ORF10575P | |
| 10580 | DNA topoisomerase III | |||
| 10630 | IS3-like element IS476 family transposase | |||
| 10635 | RM | XcaC7ORF11115P (100% identity) | XcaSB80ORF10635P | |
| 10640 | DEAD/DEAH box helicase | |||
| 22345 | HigA family addiction module antitoxin | |||
| 22350 | M | M.Xca8978ORF22320P (100% identity) | M.XcaSB80ORF22350P | |
| 22355 | UvrD-helicase domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16520 | type I restriction-modification system subunit | |||
| 16525 | R | XcaYMrrP (100% identity) | XcaSB80Mrr2P | |
| 16530 | type II toxin-antitoxin system RelE/ParE family | |||