Xylella fastidiosa subsp. fastidiosa Riv13 |
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Putative Xylella fastidiosa subsp. fastidiosa Riv13 RM systems
Ref: O'Leary,M.L. et al. unpublished
REBASE ref # 31568
Complete sequence: 2,535,286 bp
GenBank #: CP090514
REBASE acronym: Xfav13
Org_num: 56093
All begin LZ753_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1210 | DUF45 domain-containing protein | |||
| ??? | R | XfaB1ORF1340P (100% identity) | Xfav13ORF1230P | |
| ??? | S | S.XfaReb2ORFHP (100% identity) | S.Xfav13ORF1230P | |
| ??? | M | M.XfasSLORF1215P (100% identity) | M.Xfav13ORF1230P | |
| 1240 | 57 aa hypothetical protein | |||
| 11035 | 62 aa hypothetical protein | |||
| 11040 | R | XfasSLORF11075P (100% identity) | GATCNNNNNNNTGC | Xfav13ORF11050P |
| 11045 | S | S.XfaTORF2072P (100% identity) | GATCNNNNNNNTGC | S.Xfav13ORF11050P |
| 11050 | M | M.XfaTORF2072P (100% identity) | GATCNNNNNNNTGC | M.Xfav13ORF11050P |
| 11055 | HNH endonuclease family protein | |||
| 11055 | HNH endonuclease family protein | |||
| 11060 | R | XfaTIIP (100% identity) | GATCNNNNNNNTGC | Xfav13ORF11075P |
| 11065 | S | S.XfasSLORF11100P (100% identity) | GATCNNNNNNNTGC | S.Xfav13ORF11075P |
| 11070 | 87 aa hypothetical protein | |||
| 11075 | M | M.XfasSLORF11100P (100% identity) | GATCNNNNNNNTGC | M.Xfav13ORF11075P |
| 11080 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3095 | ATP-binding protein | |||
| 3100 | M | M.XfaTORF577P (100% identity) | GTCGAC | M.Xfav13ORF3100P |
| 3105 | R | XfaM23ORF606P (100% identity) | GTCGAC | R1.Xfav13ORF3100P |
| 3110 | R | R2.Xfa8ORF3055P (100% identity) | GTCGAC | R2.Xfav13ORF3100P |
| 3115 | uroporphyrinogen decarboxylase | |||
| 5605 | 50 aa hypothetical protein | |||
| ??? | M | M.XfasSLORF5700P (100% identity) | GCATGC | M.Xfav13ORF5610P |
| 5620 | Ax21 family protein | |||
| 7090 | 60 aa hypothetical protein | |||
| 7095 | M | M.XfasSLORF7175P (100% identity) | M.Xfav13ORF7095P | |
| 7100 | 71 aa hypothetical protein | |||
| 7165 | low molecular weight phosphotyrosine protein | |||
| 7170 | M | M.XfasSLORF7250P (100% identity) | M.Xfav13ORF7170P | |
| 7175 | type II toxin-antitoxin system RelE/ParE family | |||
| 8580 | 202 aa hypothetical protein | |||
| 8585 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfav13ORF8585P |
| 8590 | R | XfaWM11ORF8475P (100% identity) | TTCGAA | Xfav13ORF8585P |
| 8595 | 69 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4435 | 3-oxoacyl-ACP synthase III | |||
| 4440 | M | M.XfasSLORF4560P (100% identity) | M.Xfav13ORF4440P | |
| 4445 | R | XfasSLORF4560P (100% identity) | Xfav13ORF4440P | |
| 4450 | alpha/beta fold hydrolase | |||