Xylella fastidiosa subsp. multiplex Oak 35874 |
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Putative Xylella fastidiosa subsp. multiplex Oak 35874 RM systems
Ref: O'Leary,M.L. et al. unpublished
REBASE ref # 31568
Complete sequence: 2,621,666 bp
GenBank #: CP090511
REBASE acronym: Xfa35874
Org_num: 56100
All begin LZ754_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1200 | M48 family metallopeptidase | |||
| 1205 | R | XfaSyVAORF1729P (98% identity) | Xfa35874ORF1220P | |
| 1210 | restriction endonuclease subunit S | |||
| 1215 | S | S.XfaSyVAORF1729P (100% identity) | S.Xfa35874ORF1220P | |
| 1220 | M | M.Xfav25ORF1230BP (100% identity) | M.Xfa35874ORF1220BP | |
| 1225 | M | M.XfaSyVAORF1729P (26% identity) | M.Xfa35874ORF1220AP | |
| 1230 | biotin/lipoyl-binding protein | |||
| 11765 | 77 aa hypothetical protein | |||
| 11770 | R | XfaSyVAORF2553P (100% identity) | Xfa35874ORF11780P | |
| 11775 | S | S.XfaSyVAORF2553P (95% identity) | S.Xfa35874ORF11780P | |
| 11780 | M | M.XfaSyVAORF2553P (94% identity) | M.Xfa35874ORF11780P | |
| 11785 | HNH endonuclease family protein | |||
| 11785 | HNH endonuclease family protein | |||
| 11790 | R | XfaSyVAORF2559P (100% identity) | Xfa35874ORF11810P | |
| 11795 | S | S.Xfav25ORF11850P (13% identity) | S2.Xfa35874ORF11810P | |
| 11800 | S | S.XfaSyVAORF2559P (100% identity) | S1.Xfa35874ORF11810P | |
| 11805 | 87 aa hypothetical protein | |||
| 11810 | M | M.XfaY3CORF10835P (100% identity) | M.Xfa35874ORF11810P | |
| 11815 | LysE family translocator | |||
| 11855 | 46 aa hypothetical protein | |||
| 11860 | R | XfaSyVAORF2573P (100% identity) | Xfa35874ORF11875P | |
| 11865 | 206 aa hypothetical protein | |||
| 11870 | S | S.XfaSyVAORF2573P (95% identity) | S.Xfa35874ORF11875P | |
| 11875 | M | M.XfaSyVAORF2573P (100% identity) | M.Xfa35874ORF11875P | |
| 11880 | 130 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2000 | lysozyme | |||
| 2005 | M | M.Xfa8740ORF6330P (100% identity) | M.Xfa35874ORF2005P | |
| 2010 | type II toxin-antitoxin system HicB family | |||
| 3280 | 81 aa hypothetical protein | |||
| 3285 | M | M.XfaSyVAORF2398P (100% identity) | M.Xfa35874ORF3285P | |
| 3290 | 132 aa hypothetical protein | |||
| 5905 | 165 aa hypothetical protein | |||
| ??? | M | M.XfaY3CORF5465P (100% identity) | GCATGC | M.Xfa35874ORF5910P |
| 5920 | Ax21 family protein | |||
| 7455 | SNF2-related protein | |||
| 7460 | M | M.XfaSyVAORF3388P (100% identity) | M.Xfa35874ORF7460P | |
| 7465 | lysozyme | |||
| 8810 | 148 aa hypothetical protein | |||
| ??? | M | M.XfaSyVAORF1958P (100% identity) | GCATGC | M.Xfa35874ORF8815P |
| 8825 | R | XfaY3CORF8440P (76% identity) | GCATGC | Xfa35874ORF8815P |
| 8830 | 73 aa hypothetical protein | |||
| 8840 | 63 aa hypothetical protein | |||
| 8845 | R | XfaCO33ORF11520P (100% identity) | RGATCY | Xfa35874ORF8850P |
| 8850 | M | M.XfaCO33ORF11520P (100% identity) | RGATCY | M.Xfa35874ORF8850P |
| 8855 | 60 aa hypothetical protein | |||
| 9375 | DNA primase | |||
| 9380 | R | Xfav25ORF2910P (99% identity) | Xfa35874ORF9385P | |
| 9385 | M | M.Xfav25ORF2910P (63% identity) | M.Xfa35874ORF9385P | |
| 9390 | site-specific DNA-methyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4885 | 3-oxoacyl-ACP synthase III | |||
| 4890 | M | M.Xfa8740ORF4445P (100% identity) | M.Xfa35874ORF4890P | |
| 4895 | 94 aa hypothetical protein | |||
| 4900 | R | XfaSyVAORF2671P (99% identity) | Xfa35874ORF4890P | |
| 4905 | alpha/beta fold hydrolase | |||