Xylella fastidiosa subsp. multiplex LA-Y3C |
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Putative Xylella fastidiosa subsp. multiplex LA-Y3C RM systems
Ref: O'Leary,M.L. et al. unpublished
REBASE ref # 31568
Complete sequence: 2,526,390 bp
GenBank #: CP090510
REBASE acronym: XfaY3C
Org_num: 56099
All begin LZ759_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1195 | M48 family metallopeptidase | |||
| ??? | R | Xfa8740ORF1240P (98% identity) | XfaY3CORF1215P | |
| ??? | S | S2.Xfa8740ORF1240P (100% identity) | S2.XfaY3CORF1215P | |
| 1210 | S | S.XfaEM3ORF1215P (78% identity) | S1.XfaY3CORF1215P | |
| ??? | M | M.XfaEM3ORF1215P (91% identity) | M.XfaY3CORF1215P | |
| 1225 | 68 aa hypothetical protein | |||
| 10790 | 70 aa hypothetical protein | |||
| 10795 | R | XfaEM3ORF10555P (100% identity) | XfaY3CORF10805P | |
| 10800 | S | S.XfaEM3ORF10555P (76% identity) | S.XfaY3CORF10805P | |
| 10805 | M | M.XfasSLORF11075P (99% identity) | M.XfaY3CORF10805P | |
| 10810 | HNH endonuclease family protein | |||
| 10815 | HNH endonuclease family protein | |||
| 10820 | R | XfaEM3ORF10585P (99% identity) | XfaY3CORF10835P | |
| 10825 | S | S.XfaESVLORF11250P (100% identity) | S.XfaY3CORF10835P | |
| 10830 | 87 aa hypothetical protein | |||
| 10835 | M | M.XfaSyVAORF2559P (100% identity) | M.XfaY3CORF10835P | |
| 10840 | LysE family translocator | |||
| 10895 | 46 aa hypothetical protein | |||
| 10900 | R | Xfa081ORF11085P (100% identity) | XfaY3CORF10915P | |
| 10905 | 191 aa hypothetical protein | |||
| 10910 | S | S.XfaEM3ORF10655P (100% identity) | S.XfaY3CORF10915P | |
| 10915 | M | M.XfaRiv5ORF10760P (100% identity) | M.XfaY3CORF10915P | |
| 10920 | 130 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1960 | lysozyme | |||
| 1965 | M | M.XfaReb6ORFEP (99% identity) | M.XfaY3CORF1965P | |
| 1970 | type II toxin-antitoxin system HicB family | |||
| 3090 | 220 aa hypothetical protein | |||
| 3095 | M | M.XfaReb6ORFFP (81% identity) | M.XfaY3CORF3095P | |
| 3100 | 132 aa hypothetical protein | |||
| 5460 | 50 aa hypothetical protein | |||
| ??? | M | M.XfaRO8ORF5680P (100% identity) | GCATGC | M.XfaY3CORF5465P |
| 5475 | Ax21 family protein | |||
| 6150 | lysozyme | |||
| 6155 | M | M.XfaReb6ORFDP (100% identity) | M.XfaY3CORF6155P | |
| 6160 | 232 aa hypothetical protein | |||
| 7050 | SNF2-related protein | |||
| 7055 | M | M.XfaEM3ORF4370P (99% identity) | M.XfaY3CORF7055P | |
| 7060 | lysozyme | |||
| 7995 | 65 aa hypothetical protein | |||
| 8005 | M | M.XfaSyVAORF2041P (100% identity) | CGTACG | M.XfaY3CORF8005P |
| 8010 | R | XfaXf6cORF2780P (100% identity) | CGTACG | XfaY3CORF8005P |
| 8015 | 52 aa hypothetical protein | |||
| 8435 | 148 aa hypothetical protein | |||
| ??? | M | M.XfaRiv5ORF8290P (100% identity) | GCATGC | M.XfaY3CORF8440P |
| 8450 | R | XfaSyVAORF1958P (100% identity) | GCATGC | XfaY3CORF8440P |
| 8455 | 63 aa hypothetical protein | |||
| 8650 | DNA primase | |||
| 8655 | R | Xfa081ORF8810P (100% identity) | CCSGG | XfaY3CORF8660P |
| 8660 | M | M.XfaRiv5ORF8515P (100% identity) | CCSGG | M.XfaY3CORF8660P |
| 8665 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4765 | 3-oxoacyl-ACP synthase III | |||
| ??? | M | M.XfaEM3ORF4835P (100% identity) | M.XfaY3CORF4770P | |
| 4780 | R | XfaEM3ORF4835P (100% identity) | XfaY3CORF4770P | |
| 4785 | alpha/beta fold hydrolase | |||