Vibrio cholerae GXFL1-4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio cholerae GXFL1-4 RM systems
Ref: Yifan,Z. unpublished
REBASE ref # 33929
| Sequence length: | GenBank #: | |
| chromosome 1: | 1,154,802 bp | CP090386 |
| chromosome 2: | 3,079,090 bp | CP090387 |
| plasmid unnamed1: | 48,351 bp | CP090388 |
REBASE acronym: VchFL14
Org_num: 55998
All begin LY388_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 19340 | type II toxin-antitoxin system RelB/DinJ family | |||
| 19345 | M | M.Vch14301ORF8P (100% identity) | M.VchFL14ORF19345P | |
| 19350 | S | S.Vch14301ORF8P (100% identity) | S.VchFL14ORF19345P | |
| 19355 | R | Vch14301ORF8P (100% identity) | VchFL14ORF19345P | |
| 19360 | 184 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2360 | 237 aa hypothetical protein | |||
| 2365 | M | M.Vpa16ORF21300P (91% identity) | M.VchFL14ORF2365P | |
| 2370 | 112 aa hypothetical protein | |||
| chromosome 2 | ||||
| 6810 | AAA family ATPase | |||
| 6815 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchFL14DamP |
| 6820 | ribulose-phosphate 3-epimerase | |||
| 10860 | DEAD/DEAH box helicase | |||
| 10865 | RM | PmiHORF2479P (88% identity) | VchFL14ORF10865P | |
| 16325 | BREX-1 system phosphatase PglZ type A | |||
| 16330 | RM | SflLIN6ORF19750P (98% identity) | VchFL14ORF16330P | |
| 16335 | DUF262 domain-containing protein | |||
| 17795 | site-specific integrase | |||
| 17800 | M | M.VowVC2WORF33040P (87% identity) | M.VchFL14ORF17800P | |
| 17805 | R | VspdhgORF25325P (93% identity) | VchFL14ORF17800P | |
| 17810 | 209 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 19730 | 105 aa hypothetical protein | |||
| 19735 | M | M.VspG11DndBP (55% identity) | M.VchFL14DndBP | |
| 19740 | 72 aa hypothetical protein | |||