Burkholderia xenovorans LB400 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia xenovorans LB400 RM systems
Ref: Chain,P.S. et al. Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15280-15287 (2006)
REBASE ref # 10227
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,895,836 bp | CP000270 (NC_007951) |
| chromosome 2: | 3,363,523 bp | CP000271 (NC_007952) |
| chromosome 3: | 1,471,779 bp | CP000272 (NC_007953) |
REBASE acronym: Bxe
Org_num: 4293
All begin Bxe_A, Bxe_B, Bxe_C
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 225 | 92 aa hypothetical protein | |||
| 224 | M | M.BxeBXAORF2394P (100% identity) | M.BxeORF224P | |
| 223 | S | S.BxeBXAORF2394P (100% identity) | S.BxeORF224P | |
| 222 | R | BxeBXAORF2394P (100% identity) | BxeORF224P | |
| 221 | 151 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3355 | Malate dehydrogenase | |||
| 3354 | M | M.BxeBXAORF1055P (100% identity) | CCWGG | M.BxeORF3354P |
| 3353 | 108 aa hypothetical protein | |||
| 2643 | DNA relaxase/nickase, TraS/VirD2- like | |||
| 2642 | M | D12 class N6 adenine-specific DNA methyltransferase | M.BxeORF2642AP | |
| 2641 | IS110 family transposase | |||
| 4512 | IS110 family transposase | |||
| ??? | M | M.BxeORF2638P (100% identity) | M.BxeORF2642BP | |
| 4515 | 143 aa Hypothetical protein | |||
| 2640 | IS110 family transposase | |||
| ??? | M | M.BxeORF2642BP (100% identity) | M.BxeORF2638P | |
| 2636 | 143 aa Hypothetical protein | |||
| 1235 | 244 aa hypothetical protein | |||
| 1234 | R | BxeBXAORF3392P (100% identity) | CCATGG | BxeORF1234P |
| 1233 | M | M.BxeBXAORF3392P (100% identity) | CCATGG | M.BxeORF1234P |
| 1232 | 251 aa Conserved hypothetical protein | |||
| 1223 | DNA topoisomerase III | |||
| 1222 | M | M.PpuRRORF11P (100% identity) | M.BxeORF1222P | |
| 1221 | 185 aa Conserved hypothetical protein | |||
| chromosome 2 | ||||
| 2881 | tryptophan synthase, beta chain | |||
| 2880 | M | M.BxeBXAORF5210P (100% identity) | M.BxeORF2880P | |
| 2879 | tryptophan synthase, alpha chain | |||
| 1983 | DNA relaxase/nickase, TraS/VirD2-like protein | |||
| ??? | M | M.BxeBXAORFAP (100% identity) | M.BxeORF1981P | |
| 1980 | 130 aa hypothetical protein | |||
| chromosome 3 | ||||
| 462 | DNA relaxase/nickase, TraS/VirD2-like | |||
| 463 | M | M.BxeBXAORF7979P (100% identity) | M.BxeORF463P | |
| 464 | 142 aa hypothetical protein | |||