Escherichia coli D16EC0527 |
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Putative Escherichia coli D16EC0527 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,945,849 bp | CP088892 |
| plasmid pD16EC0527-1: | 150,588 bp | CP088893 |
REBASE acronym: EcoC0527
Org_num: 53689
All begin LQT71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18490 | type IV toxin-antitoxin system AbiEi family | |||
| 18495 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0527ORF18500P |
| 18500 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0527ORF18500P |
| 18505 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0527ORF18500P |
| 18510 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1995 | cell division protein DamX | |||
| 2000 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0527DamP |
| 2005 | ribulose-phosphate 3-epimerase | |||
| 2595 | DUF2556 family protein | |||
| 2600 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0527ORF2600P |
| 2605 | DNA-binding transcriptional regulator Fis | |||
| 9970 | phosphohydrolase | |||
| 9975 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0527DcmP |
| 9980 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0527DcmP |
| 9985 | drug/metabolite exporter YedA | |||
| 20430 | McrC family protein | |||
| 20435 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0527ORF20440P |
| 20440 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0527ORF20440P |
| 20445 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0527ORF20440P |
| 20450 | helix-turn-helix domain-containing protein | |||
| 20715 | 174 aa hypothetical protein | |||
| 20720 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC0527ORF20720P |
| 20725 | ATP-binding protein | |||
| 20730 | response regulator receiver domain | |||
| 20735 | R | Ecos19ORF20635P (100% identity) | EcoC0527ORF20735P | |
| 20740 | 97 aa hypothetical protein | |||
| plasmid pD16EC0527-1 | ||||
| 24325 | 103 aa hypothetical protein | |||
| 24330 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0527ORF24330P |
| 24335 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20420 | glycosyltransferase | |||
| 20425 | R | EcosS3McrBP (100% identity) | EcoC0527McrBP | |
| 20430 | R | EcosS9McrCP (100% identity) | EcoC0527McrCP | |
| 20435 | Alw26I/Eco31I/Esp3I family type II restriction | |||