Erwinia tracheiphila BHKY |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Erwinia tracheiphila BHKY RM systems
Ref: LaSarre,B. et al. unpublished
REBASE ref # 33355
Complete sequence: 4,920,713 bp
GenBank #: CP089932
REBASE acronym: EtrBHKY
Org_num: 53558
All begin LU633_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 735 | DUF2235 domain-containing protein | |||
| 740 | R | EtrSCR3ORF320P (100% identity) | GCTNAGC | EtrBHKYORF745P |
| 745 | M | M.EtrSCR3ORF320P (100% identity) | GCTNAGC | M.EtrBHKYORF745P |
| 750 | biofilm formation regulator HmsP | |||
| 2645 | SPOR domain-containing protein | |||
| 2650 | M | M.EtrGHDamP (100% identity) | GATC | M.EtrBHKYDamP |
| 2655 | ribulose-phosphate 3-epimerase | |||
| 3105 | acyltransferase | |||
| 3110 | M | M.EtrGHORF4435P (100% identity) | M.EtrBHKYORF3110P | |
| 3115 | 78 aa hypothetical protein | |||
| 4225 | 367 aa hypothetical protein | |||
| 4230 | R | EtrGHORF5565P (100% identity) | EtrBHKYORF4235P | |
| 4235 | M | M.EtrGHORF5565P (100% identity) | M.EtrBHKYORF4235P | |
| 4240 | integrase | |||
| 5685 | 85 aa hypothetical protein | |||
| 5690 | M | M.EtrGHORF7010P (100% identity) | M.EtrBHKYORF5690P | |
| 5695 | 91 aa hypothetical protein | |||
| 5800 | 78 aa hypothetical protein | |||
| 5805 | M | M.EtrGHORF7125P (100% identity) | M.EtrBHKYORF5805P | |
| 5810 | sugar O-acetyltransferase | |||
| 6605 | 88 aa hypothetical protein | |||
| 6610 | M | M.EtrGHORF7925P (100% identity) | M.EtrBHKYORF6610P | |
| 6615 | DUF2441 domain-containing protein | |||
| 7885 | type III secretion system effector protein | |||
| 7890 | M | M.EtrGHORF9205P (100% identity) | M.EtrBHKYORF7890P | |
| 7895 | IS481 family transposase | |||
| 10390 | DUF1367 family protein | |||
| 10395 | M | M.EtrGHORF12190P (100% identity) | GATC | M.EtrBHKYORF10395P |
| 10400 | DUF1364 domain-containing protein | |||
| 10575 | epoxyqueuosine reductase QueH | |||
| 10580 | M | M.EtrSCR3ORF14135P (100% identity) | M.EtrBHKYORF10580P | |
| 10585 | V | V.EtrGHORF12375P (100% identity) | V.EtrBHKYORF10580P | |
| 10590 | 88 aa hypothetical protein | |||
| 11825 | 68 aa hypothetical protein | |||
| 11830 | M | M.EtrMDORF17810P (100% identity) | GATC | M.EtrBHKYORF11830P |
| 11835 | 3-5 exoribonuclease | |||
| 13495 | 78 aa hypothetical protein | |||
| 13500 | M | M.EtrGHORF15290P (100% identity) | M.EtrBHKYORF13500P | |
| 13505 | 118 aa hypothetical protein | |||
| 19165 | type II toxin-antitoxin system Phd/YefM family | |||
| 19170 | M | M.EtrGHORF20720P (100% identity) | M.EtrBHKYORF19170P | |
| 19175 | type II toxin-antitoxin system HicB family | |||
| 19205 | 68 aa hypothetical protein | |||
| 19210 | M | M.EtrMDORF17810P (100% identity) | GATC | M.EtrBHKYORF19210P |
| 19215 | 3-5 exoribonuclease | |||
| 22260 | RAQPRD family integrative conjugative element | |||
| 22265 | M | M.EtrGHORF23825P (100% identity) | GGCGCC | M.EtrBHKYORF22265P |
| 22270 | R | EtrGHORF23825P (100% identity) | GGCGCC | EtrBHKYORF22265P |
| 22275 | TIGR03747 family integrating conjugative element | |||
| 22370 | DUF2857 domain-containing protein | |||
| 22375 | M | M.EtrGHORF23935P (100% identity) | M.EtrBHKYORF22375P | |
| 22380 | ParB family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10525 | helix-turn-helix domain-containing protein | |||
| 10530 | R | EtrGHORF12330P (100% identity) | EtrBHKYORF10535P | |
| 10535 | M | M.EtrGHORF12330BP (100% identity) | M.EtrBHKYORF10535BP | |
| 10540 | IS256 family transposase | |||
| 10545 | M | M.EtrGHORF12330AP (100% identity) | M.EtrBHKYORF10535AP | |
| 10550 | integrase arm-type DNA-binding domain-containing | |||