Escherichia coli 5-1 |
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Putative Escherichia coli 5-1 RM systems
Ref: Yuan,W.-L. unpublished
REBASE ref # 33357
| Sequence length: | GenBank #: | |
| Chromosome: | 5,112,678 bp | CP089445 |
| plasmid unnamed1: | 129,071 bp | CP089446 |
| plasmid unnamed2: | 125,150 bp | CP089447 |
REBASE acronym: Eco51Y
Org_num: 53565
All begin LT922_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5140 | ash family protein | |||
| 5145 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco51YORF5150P |
| 5150 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco51YORF5150P |
| 5155 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco51YORF5150P |
| 5160 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2920 | helix-turn-helix domain-containing protein | |||
| 2925 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco51YORF2925P |
| 2930 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco51YORF2925P |
| 2935 | IS1380-like element ISEcp1 family transposase | |||
| 2960 | McrC family protein | |||
| 2965 | R | EcosS9ORF2810P (94% identity) | Eco51YORF2965P | |
| 2970 | type B chloramphenicol O-acetyltransferase | |||
| 8370 | 71 aa hypothetical protein | |||
| 8375 | M | M.KpnYN1ORFGP (89% identity) | M.Eco51YORF8375P | |
| 8380 | helix-turn-helix domain-containing protein | |||
| 13840 | drug/metabolite exporter YedA | |||
| 13845 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco51YDcmP |
| 13850 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco51YDcmP |
| 13855 | phosphohydrolase | |||
| 17690 | phage lysis protein EssD | |||
| 17695 | M | M.Sso63633ORF22290P (100% identity) | M.Eco51YORF17695P | |
| 17700 | 67 aa hypothetical protein | |||
| 17730 | LexA family transcriptional regulator | |||
| 17735 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco51YORF17735P |
| 17740 | PerC family transcriptional regulator | |||
| 17815 | AAA family ATPase | |||
| 17820 | M | M.Ecoi64ORF2425P (100% identity) | M.Eco51YORF17820P | |
| 17825 | carbon starvation induced protein CsiD | |||
| 21555 | DNA-binding transcriptional regulator Fis | |||
| 21560 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco51YORF21560P |
| 21565 | DUF2556 family protein | |||
| 22155 | ribulose-phosphate 3-epimerase | |||
| 22160 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco51YDamP |
| 22165 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 25715 | 73 aa hypothetical protein | |||
| 25720 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco51YORF25720P |
| 25725 | 103 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25930 | 97 aa hypothetical protein | |||
| 25935 | M | M.Xca80ORFEP (100% identity) | M.Eco51YORF25935P | |
| 25940 | 73 aa hypothetical protein | |||
| 26330 | 56 aa hypothetical protein | |||
| 26335 | M | M.SmaQC11ORF52800P (100% identity) | M.Eco51YORF26335P | |
| 26340 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2955 | IS6-like element IS26 family transposase | |||
| 2960 | R | Ecos9McrCP (57% identity) | Eco51YMcrCBP | |
| 2965 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 2970 | type B chloramphenicol O-acetyltransferase | |||
| 2975 | oxacillin-hydrolyzing class D beta-lactamase | |||
| 2980 | fluoroquinolone-acetylating aminoglycoside | |||
| 2985 | IS6-like element IS26 family transposase | |||
| 2990 | R | Ecos9McrCP (43% identity) | Eco51YMcrCAP | |
| 2995 | R | EcosS3McrBP (100% identity) | Eco51YMcrBP | |
| 3000 | glycosyltransferase | |||