Escherichia coli A16EC0070 |
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Putative Escherichia coli A16EC0070 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,059,867 bp | CP088866 |
| plasmid pA16EC0070-1: | 89,863 bp | CP088867 |
| plasmid pA16EC0070-2: | 93,054 bp | CP088868 |
REBASE acronym: EcoC0070
Org_num: 53582
All begin LQQ91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20545 | type IV toxin-antitoxin system AbiEi family | |||
| 20550 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0070ORF20555P |
| 20555 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0070ORF20555P |
| 20560 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0070ORF20555P |
| 20565 | ash family protein | |||
| 22365 | restriction endonuclease | |||
| 22370 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoC0070ORF22370P |
| 22375 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoC0070ORF22370P |
| 22380 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoC0070ORF22370P |
| 22385 | endoribonuclease SymE | |||
| 24120 | IS3-like element ISSen4 family transposase | |||
| 24125 | R | EcotcmA3ORF16550P (99% identity) | EcoC0070ORF24145P | |
| 24130 | DNA-protecting protein DprA | |||
| 24135 | RecQ family ATP-dependent DNA helicase | |||
| 24140 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoC0070ORF24145P | |
| 24145 | M | M.Pre393ORF2750P (100% identity) | M.EcoC0070ORF24145P | |
| 24150 | helix-turn-helix domain-containing protein | |||
| plasmid pA16EC0070-2 | ||||
| 25370 | IS1-like element IS1A family transposase | |||
| 25375 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0070ORF25375P | |
| 25380 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3985 | DUF2556 family protein | |||
| 3990 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0070ORF3990P |
| 3995 | DNA-binding transcriptional regulator Fis | |||
| 11215 | TrmB family transcriptional regulator | |||
| 11220 | M | M.Ecod58ORF7600P (99% identity) | A | M.EcoC0070ORF11220P |
| 11240 | 39 aa hypothetical protein | |||
| 11465 | phosphohydrolase | |||
| 11470 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0070DcmP |
| 11475 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0070DcmP |
| 11480 | drug/metabolite exporter YedA | |||
| 15025 | DUF3927 family protein | |||
| 15040 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0070ORF15040P |
| 15045 | TrmB family transcriptional regulator | |||
| 17295 | helix-turn-helix domain-containing protein | |||
| 17300 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0070ORF17300P | |
| 17305 | 71 aa hypothetical protein | |||
| 22600 | McrC family protein | |||
| 22605 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0070ORF22610P |
| 22610 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0070ORF22610P |
| 22615 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0070ORF22610P |
| 22620 | helix-turn-helix domain-containing protein | |||
| plasmid pA16EC0070-1 | ||||
| 24875 | type II toxin-antitoxin system PemK/MazF family | |||
| 24880 | M | M.Sen59886ORF20870P (92% identity) | M.EcoC0070ORF24880P | |
| 24885 | R | Eho233ORF24860P (91% identity) | EcoC0070ORF24880P | |
| 24890 | TraM recognition domain-containing protein | |||
| 24735 | group II intron reverse transcriptase/maturase | |||
| 24740 | M | M.Sso128ORF27515P (88% identity) | M.EcoC0070ORF24740P | |
| 24745 | 73 aa hypothetical protein | |||
| plasmid pA16EC0070-2 | ||||
| 25310 | 73 aa hypothetical protein | |||
| 25315 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0070ORF25315P |
| 25320 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22590 | glycosyltransferase | |||
| 22595 | R | EcosS3McrBP (100% identity) | EcoC0070McrBP | |
| 22600 | R | EcosS9McrCP (100% identity) | EcoC0070McrCP | |
| 22605 | Alw26I/Eco31I/Esp3I family type II restriction | |||