Escherichia coli A16EC0796 |
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Putative Escherichia coli A16EC0796 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,160,491 bp | CP088835 |
| plasmid pA16EC0796-1: | 104,469 bp | CP088836 |
REBASE acronym: EcoC0796
Org_num: 53590
All begin LQT20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10585 | IS3 family transposase | |||
| 10590 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoC0796ORF10590P |
| 10595 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoC0796ORF10590P |
| 10600 | YecA family protein | |||
| 10605 | cold shock domain-containing protein | |||
| 10610 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | EcoC0796ORF10590P |
| 10615 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2565 | DUF2556 family protein | |||
| 2570 | M | M.Sdy12039ORFBP (69% identity) | M.EcoC0796ORF2570P | |
| 2575 | IS66 family insertion sequence hypothetical | |||
| 7010 | DUF1382 family protein | |||
| 7015 | M | M.SspPIBORF6330P (100% identity) | GATC | M.EcoC0796ORF7015P |
| 7020 | PerC family transcriptional regulator | |||
| 10325 | phosphohydrolase | |||
| 10330 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.EcoC0796DcmP |
| 10335 | V | V.Ecos142DcmP (100% identity) | V.EcoC0796DcmP | |
| 10340 | drug/metabolite exporter YedA | |||
| 14045 | DUF3927 family protein | |||
| 14060 | M | M.SsoL4094ORF17545P (100% identity) | A | M.EcoC0796ORF14060P |
| 14065 | TrmB family transcriptional regulator | |||
| 21590 | PerC family transcriptional regulator | |||
| 21595 | M | M.EcoNIH1ORF1465P (100% identity) | GATC | M.EcoC0796ORF21595P |
| 21600 | LexA family transcriptional regulator | |||
| 21630 | 67 aa hypothetical protein | |||
| 21635 | M | M.EcoNIH1ORF1505P (100% identity) | M.EcoC0796ORF21635P | |
| 21640 | phage holin, lambda family | |||
| 23150 | LexA family transcriptional regulator | |||
| 23155 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.EcoC0796ORF23155P |
| 23160 | PerC family transcriptional regulator | |||
| plasmid pA16EC0796-1 | ||||
| 25145 | 103 aa hypothetical protein | |||
| 25150 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0796ORF25150P |
| 25155 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19705 | SNF2-related protein | |||
| 19710 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoC0796ORF19710P |
| 19715 | R | SflN116ORF19490P (100% identity) | GAACC | EcoC0796ORF19710P |
| 19720 | 100 aa hypothetical protein | |||