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Putative Escherichia coli B16EC0214 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Sequence length: | GenBank #: | |
Chromosome: | 5,122,383 bp | CP088818 |
plasmid pB16EC0214-1: | 146,716 bp | CP088819 |
REBASE acronym: EcoC0214
Org_num: 53602
All begin LQR24_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18585 | type IV toxin-antitoxin system AbiEi family | |||
18590 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0214ORF18595P |
18595 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0214ORF18595P |
18600 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0214ORF18595P |
18605 | ash family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1805 | PerC family transcriptional regulator | |||
1810 | M | M.EcoC0346ORF1815P (100% identity) | GATC | M.EcoC0214ORF1810P |
1815 | LexA family transcriptional regulator | |||
1845 | 67 aa hypothetical protein | |||
1850 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0214ORF1850P | |
1855 | phage lysis protein EssD | |||
2855 | conjugal transfer protein TraG N-terminal | |||
2860 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0214ORF2860P | |
2865 | R | EcosS3ORF15775P (100% identity) | EcoC0214ORF2860P | |
2870 | response regulator receiver domain | |||
3845 | 97 aa hypothetical protein | |||
3850 | R | Ecos19ORF20635P (100% identity) | EcoC0214ORF3850P | |
3855 | response regulator receiver domain | |||
3860 | ATP-binding protein | |||
3865 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC0214ORF3865P |
3870 | 174 aa hypothetical protein | |||
4135 | helix-turn-helix domain-containing protein | |||
4140 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0214ORF4140P |
4145 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0214ORF4140P |
4150 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0214ORF4140P |
4155 | McrC family protein | |||
10160 | phosphohydrolase | |||
10165 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0214DcmP |
10170 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0214DcmP |
10175 | drug/metabolite exporter YedA | |||
14360 | DUF3927 family protein | |||
14375 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoC0214ORF14375P |
14380 | TrmB family transcriptional regulator | |||
22335 | DNA-binding transcriptional regulator Fis | |||
22340 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0214ORF22340P |
22345 | DUF2556 family protein | |||
22955 | ribulose-phosphate 3-epimerase | |||
22960 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0214DamP |
22965 | cell division protein DamX | |||
plasmid pB16EC0214-1 | ||||
25730 | 103 aa hypothetical protein | |||
25735 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0214ORF25735P |
25740 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
9960 | shufflon system plasmid conjugative transfer | |||
9965 | R | Ecost88ORF24685P (100% identity) | EcoC0214ORF9970P | |
9970 | M | M.EcosS2ORF3675P (100% identity) | M.EcoC0214ORF9970P | |
9975 | SpnT protein |