Escherichia coli B16EC0481 |
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Putative Escherichia coli B16EC0481 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,987,925 bp | CP088800 |
| plasmid pB16EC0481-4: | 97,433 bp | CP088801 |
REBASE acronym: EcoC0481
Org_num: 53607
All begin LQT02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19475 | DNA-binding protein | |||
| 19480 | M | M.EcoHs3III (100% identity) | TWCANNNNNNTGG | M.EcoC0481ORF19480P |
| 19485 | S | S.EcoHs3III (100% identity) | TWCANNNNNNTGG | S.EcoC0481ORF19480P |
| 19490 | R | EcoHs3IIIP (100% identity) | TWCANNNNNNTGG | EcoC0481ORF19480P |
| 19495 | lactate utilization protein C | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2685 | cell division protein DamX | |||
| 2690 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0481DamP |
| 2695 | ribulose-phosphate 3-epimerase | |||
| 3310 | DUF2556 family protein | |||
| 3315 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoC0481ORF3315P |
| 3320 | DNA-binding transcriptional regulator Fis | |||
| 10645 | phosphohydrolase | |||
| 10650 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoC0481DcmP |
| 10655 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC0481DcmP |
| 10660 | drug/metabolite exporter YedA | |||
| 12650 | DUF977 family protein | |||
| 12655 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC0481ORF12655P | |
| 12660 | 139 aa hypothetical protein | |||
| 14325 | DUF3927 family protein | |||
| 14340 | M | M.Spn7978ORF3515P (100% identity) | A | M.EcoC0481ORF14340P |
| 14345 | TrmB family transcriptional regulator | |||
| 19530 | zinc ribbon domain-containing protein | |||
| 19535 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.EcoC0481ORF19535P |
| 19540 | tyrosine-type recombinase/integrase | |||
| plasmid pB16EC0481-4 | ||||
| 25485 | 103 aa hypothetical protein | |||
| 25490 | M | M.SspPIBORF23080P (100% identity) | M.EcoC0481ORF25490P | |
| 25495 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21225 | 100 aa hypothetical protein | |||
| 21230 | R | SflN116ORF19490P (100% identity) | GAACC | EcoC0481ORF21235P |
| 21235 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoC0481ORF21235P |
| 21240 | SNF2-related protein | |||
| 22360 | S8 family peptidase | |||
| 22365 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.EcoC0481ORF22365P |
| 22370 | R | Kpn0718ORF815P (100% identity) | ACCACC | EcoC0481ORF22365P |
| 22375 | 97 aa hypothetical protein | |||