Escherichia coli B16EC0331 |
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Putative Escherichia coli B16EC0331 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,956,691 bp | CP088804 |
| plasmid pB16EC0331-1: | 151,906 bp | CP088805 |
| plasmid pB16EC0331-2: | 237,206 bp | CP088806 |
REBASE acronym: EcoC0331
Org_num: 53605
All begin LQT56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7675 | SIR2 family protein | |||
| 7680 | S | S.EcoECB1ORF9045P (100% identity) | TGANNNNNNCTTT | S.EcoC0331ORF7685P |
| 7685 | M | M.EcoDEC2DORF4922P (100% identity) | TGANNNNNNCTTT | M.EcoC0331ORF7685P |
| 7690 | R | Eco9604ORFHP (100% identity) | TGANNNNNNCTTT | EcoC0331ORF7685P |
| 7695 | transposase | |||
| 15315 | endoribonuclease SymE | |||
| 15320 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.EcoC0331ORF15325P |
| 15325 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoC0331ORF15325P |
| 15330 | R | Ssp28760ORF3465P (99% identity) | TGANNNNNNNNTGCT | EcoC0331ORF15325P |
| 15335 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2200 | drug/metabolite exporter YedA | |||
| 2205 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC0331DcmP |
| 2210 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC0331DcmP |
| 2215 | HD domain-containing protein | |||
| 9470 | DNA-binding transcriptional regulator Fis | |||
| 9475 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC0331ORF9475P |
| 9480 | DUF2556 family protein | |||
| 10120 | ribulose-phosphate 3-epimerase | |||
| 10125 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0331DamP |
| 10130 | cell division protein DamX | |||
| plasmid pB16EC0331-1 | ||||
| 24010 | IS1 family transposase | |||
| 24015 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.EcoC0331ORF24015P |
| 24020 | R | Ssp3CORF24390P (100% identity) | CCWGG | EcoC0331ORF24015P |
| 24025 | IS6-like element IS26 family transposase | |||
| 24590 | 73 aa hypothetical protein | |||
| 24595 | M | M.SenS318ORF60P (100% identity) | M.EcoC0331ORF24595P | |
| 24600 | 103 aa hypothetical protein | |||
| plasmid pB16EC0331-2 | ||||
| 25035 | thermonuclease family protein | |||
| 25040 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoC0331ORF25040P |
| 25045 | 55 aa hypothetical protein | |||
| 25445 | IS5-like element IS5 family transposase | |||
| 25450 | M | M.YpsF1ORFBP (100% identity) | M.EcoC0331ORF25450P | |
| 25455 | 202 aa hypothetical protein | |||
| 25560 | DNA-binding protein | |||
| 25565 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoC0331ORF25565P |
| 25570 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15305 | R | Ssp28760McrCP (100% identity) | EcoC0331McrCP | |
| 15310 | R | Ssp28760McrBP (100% identity) | EcoC0331McrBP | |
| 15315 | endoribonuclease SymE | |||
| 15330 | type I restriction-modification system | |||
| 15335 | R | Ssp28760MrrP (100% identity) | EcoC0331MrrP | |
| 15340 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20035 | TraR/DksA family transcriptional regulator | |||
| 20040 | M | M.Ecos671ORFBP (100% identity) | GATC | M.EcoC0331ORF20040P |
| 20045 | replication endonuclease | |||