Escherichia coli B17EC0381 |
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Putative Escherichia coli B17EC0381 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,003,860 bp | CP088698 |
| plasmid pB17EC0381-1: | 95,428 bp | CP088699 |
| plasmid pB17EC0381-2: | 99,624 bp | CP088700 |
REBASE acronym: EcoC0381
Org_num: 53634
All begin LQR29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18975 | type IV toxin-antitoxin system AbiEi family | |||
| 18980 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0381ORF18985P |
| 18985 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0381ORF18985P |
| 18990 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0381ORF18985P |
| 18995 | ash family protein | |||
| 20795 | restriction endonuclease | |||
| 20800 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0381ORF20800P |
| 20805 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0381ORF20800P |
| 20810 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0381ORF20800P |
| 20815 | endoribonuclease SymE | |||
| plasmid pB17EC0381-1 | ||||
| 25030 | type II toxin-antitoxin system Phd/YefM family | |||
| 25035 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoC0381ORF25035P |
| 25040 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoC0381ORF25035P |
| 24450 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoC0381ORF25035P |
| 24455 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2505 | DUF2556 family protein | |||
| 2510 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0381ORF2510P |
| 2515 | DNA-binding transcriptional regulator Fis | |||
| 9640 | phosphohydrolase | |||
| 9645 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0381DcmP |
| 9650 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0381DcmP |
| 9655 | drug/metabolite exporter YedA | |||
| 10535 | TrmB family transcriptional regulator | |||
| 10540 | M | M.Ecod58ORF7600P (100% identity) | A | M.EcoC0381ORF10540P |
| 10565 | class II holin family protein | |||
| 13540 | DUF3927 family protein | |||
| 13555 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0381ORF13555P |
| 13560 | TrmB family transcriptional regulator | |||
| 15820 | helix-turn-helix domain-containing protein | |||
| 15825 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0381ORF15825P | |
| 15830 | 71 aa hypothetical protein | |||
| 21145 | McrC family protein | |||
| 21150 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0381ORF21155P |
| 21155 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0381ORF21155P |
| 21160 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0381ORF21155P |
| 21165 | helix-turn-helix domain-containing protein | |||
| plasmid pB17EC0381-1 | ||||
| 24505 | 103 aa hypothetical protein | |||
| 24510 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0381ORF24510P |
| 24515 | 73 aa hypothetical protein | |||
| plasmid pB17EC0381-2 | ||||
| 25240 | 24 aa hypothetical protein | |||
| 25245 | M | M.SsoST152ORF25555P (100% identity) | M.EcoC0381ORF25245P | |
| 25250 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21135 | glycosyltransferase | |||
| 21140 | R | EcosS3McrBP (100% identity) | EcoC0381McrBP | |
| 21145 | R | EcosS9McrCP (100% identity) | EcoC0381McrCP | |
| 21150 | Alw26I/Eco31I/Esp3I family type II restriction | |||