|
Putative Escherichia coli C16EC0787 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Sequence length: | GenBank #: | |
Chromosome: | 5,220,684 bp | CP088637 |
plasmid pC16EC0787-1: | 107,687 bp | CP088638 |
plasmid pC16EC0787-3: | 70,512 bp | CP088640 |
REBASE acronym: EcoC0787
Org_num: 53658
All begin LQT06_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3830 | endoribonuclease SymE | |||
3835 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0787ORF3845P |
3840 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0787ORF3845P |
3845 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0787ORF3845P |
3850 | restriction endonuclease | |||
5930 | ash family protein | |||
5935 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0787ORF5940P |
5940 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0787ORF5940P |
5945 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0787ORF5940P |
5950 | type IV toxin-antitoxin system AbiEi family | |||
plasmid pC16EC0787-1 | ||||
25610 | IS1-like element IS1A family transposase | |||
25615 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0787ORF25615P | |
25620 | type II toxin-antitoxin system Phd/YefM family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5715 | PerC family transcriptional regulator | |||
5720 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0787ORF5720P |
5725 | LexA family transcriptional regulator | |||
5760 | 95 aa hypothetical protein | |||
5765 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0787ORF5765P | |
5770 | phage lysis protein EssD | |||
9450 | 71 aa hypothetical protein | |||
9455 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0787ORF9455P | |
9460 | helix-turn-helix domain-containing protein | |||
11740 | TrmB family transcriptional regulator | |||
11745 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0787ORF11745P |
11760 | DUF3927 family protein | |||
15295 | drug/metabolite exporter YedA | |||
15300 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0787DcmP |
15305 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0787DcmP |
15310 | phosphohydrolase | |||
18440 | PerC family transcriptional regulator | |||
18445 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0787ORF18445P |
18450 | DUF1382 family protein | |||
22825 | DNA-binding transcriptional regulator Fis | |||
22830 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0787ORF22830P |
22835 | DUF2556 family protein | |||
23425 | ribulose-phosphate 3-epimerase | |||
23430 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0787DamP |
23435 | cell division protein DamX | |||
24950 | BREX system P-loop protein BrxC | |||
24955 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoC0787ORF24955P |
24960 | BREX-1 system phosphatase PglZ type A | |||
plasmid pC16EC0787-1 | ||||
26215 | 73 aa hypothetical protein | |||
26220 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0787ORF26220P |
26225 | 103 aa hypothetical protein | |||
plasmid pC16EC0787-3 | ||||
26995 | 73 aa hypothetical protein | |||
27000 | M | M.Kpn121ORF28445P (100% identity) | M.EcoC0787ORF27000P | |
27005 | 103 aa hypothetical protein |