Escherichia coli C16EC0672 |
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Putative Escherichia coli C16EC0672 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,037,008 bp | CP088652 |
| plasmid pC16EC0672-2: | 70,220 bp | CP088653 |
REBASE acronym: EcoC0672
Org_num: 53653
All begin LQT73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5735 | ash family protein | |||
| 5740 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0672ORF5745P |
| 5745 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0672ORF5745P |
| 5750 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0672ORF5745P |
| 5755 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3505 | 97 aa hypothetical protein | |||
| 3510 | R | Ecos19ORF20635P (100% identity) | EcoC0672ORF3510P | |
| 3515 | response regulator receiver domain | |||
| 3520 | ATP-binding protein | |||
| 3525 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC0672ORF3525P |
| 3530 | 174 aa hypothetical protein | |||
| 3795 | helix-turn-helix domain-containing protein | |||
| ??? | M | M1.EcosS9ORF2810P (100% identity) | M1.EcoC0672ORF3800P | |
| 3810 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0672ORF3800P |
| 3815 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0672ORF3800P |
| 3820 | McrC family protein | |||
| 14480 | 39 aa hypothetical protein | |||
| 14500 | M | M.EcoK1516ORFHP (100% identity) | A | M.EcoC0672ORF14500P |
| 14505 | TrmB family transcriptional regulator | |||
| 14505 | TrmB family transcriptional regulator | |||
| 14510 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoC0672ORF14520P |
| 14515 | R | R2.EcosS3ORF2905P (99% identity) | GTCGAC | R2.EcoC0672ORF14520P |
| 14520 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoC0672ORF14520P |
| 14525 | antitermination protein | |||
| 15100 | drug/metabolite exporter YedA | |||
| 15105 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0672DcmP |
| 15110 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0672DcmP |
| 15115 | phosphohydrolase | |||
| 22580 | DNA-binding transcriptional regulator Fis | |||
| 22585 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0672ORF22585P |
| 22590 | DUF2556 family protein | |||
| 23175 | ribulose-phosphate 3-epimerase | |||
| 23180 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0672DamP |
| 23185 | cell division protein DamX | |||
| plasmid pC16EC0672-2 | ||||
| 25460 | 73 aa hypothetical protein | |||
| 25465 | M | M.Ssop356ORFAP (100% identity) | M.EcoC0672ORF25465P | |
| 25470 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3815 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 3820 | R | EcosS9McrCP (100% identity) | EcoC0672McrCP | |
| 3825 | R | EcosS3McrBP (100% identity) | EcoC0672McrBP | |
| 3830 | glycosyltransferase | |||