Escherichia coli D16EC0206 |
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Putative Escherichia coli D16EC0206 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,142,195 bp | CP088612 |
| plasmid pD16EC0206-2: | 155,469 bp | CP088611 |
REBASE acronym: EcoC0206
Org_num: 53684
All begin LQT40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14755 | type IV toxin-antitoxin system AbiEi family | |||
| 14760 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0206ORF14765P |
| 14765 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0206ORF14765P |
| 14770 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0206ORF14765P |
| 14775 | ash family protein | |||
| 16580 | restriction endonuclease | |||
| 16585 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0206ORF16585P |
| 16590 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0206ORF16585P |
| 16595 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0206ORF16585P |
| 16600 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5115 | phosphohydrolase | |||
| 5120 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0206DcmP |
| 5125 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0206DcmP |
| 5130 | drug/metabolite exporter YedA | |||
| 5995 | antitermination protein | |||
| 6000 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoC0206ORF6000P |
| 6005 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoC0206ORF6000P |
| 6010 | R | R1.EcosS3ORF2905P (100% identity) | R2.EcoC0206ORF6000P | |
| 6015 | TrmB family transcriptional regulator | |||
| 8985 | DUF3927 family protein | |||
| 9000 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0206ORF9000P |
| 9005 | TrmB family transcriptional regulator | |||
| 11275 | helix-turn-helix domain-containing protein | |||
| 11280 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0206ORF11280P | |
| 11285 | 71 aa hypothetical protein | |||
| 16925 | McrC family protein | |||
| 16930 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0206ORF16935P |
| 16935 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0206ORF16935P |
| 16940 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0206ORF16935P |
| 16945 | helix-turn-helix domain-containing protein | |||
| 22370 | cell division protein DamX | |||
| 22375 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0206DamP |
| 22380 | ribulose-phosphate 3-epimerase | |||
| 22970 | DUF2556 family protein | |||
| 22975 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0206ORF22975P |
| 22980 | DNA-binding transcriptional regulator Fis | |||
| plasmid pD16EC0206-2 | ||||
| 1470 | 103 aa hypothetical protein | |||
| 1475 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoC0206ORF1475P | |
| 1480 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16915 | glycosyltransferase | |||
| 16920 | R | EcosS3McrBP (100% identity) | EcoC0206McrBP | |
| 16925 | R | EcosS9McrCP (100% identity) | EcoC0206McrCP | |
| 16930 | Alw26I/Eco31I/Esp3I family type II restriction | |||