Escherichia coli C17EC0146 |
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Putative Escherichia coli C17EC0146 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,210,823 bp | CP088621 |
| plasmid pC17EC0146-1: | 18,284 bp | CP088622 |
| plasmid pC17EC0146-2: | 113,630 bp | CP088623 |
REBASE acronym: EcoC0146
Org_num: 53663
All begin LQR15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19560 | type IV toxin-antitoxin system AbiEi family | |||
| 19565 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0146ORF19570P |
| 19570 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0146ORF19570P |
| 19575 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0146ORF19570P |
| 19580 | ash family protein | |||
| 21645 | restriction endonuclease | |||
| 21650 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoC0146ORF21650P |
| 21655 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoC0146ORF21650P |
| 21660 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoC0146ORF21650P |
| 21665 | endoribonuclease SymE | |||
| plasmid pC17EC0146-1 | ||||
| 25550 | type II toxin-antitoxin system Phd/YefM family | |||
| 25555 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0146ORF25555P | |
| 25560 | IS1-like element IS1A family transposase | |||
| plasmid pC17EC0146-2 | ||||
| 26250 | type II toxin-antitoxin system Phd/YefM family | |||
| 26255 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0146ORF26255P | |
| 26260 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2175 | cell division protein DamX | |||
| 2180 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0146DamP |
| 2185 | ribulose-phosphate 3-epimerase | |||
| 2775 | DUF2556 family protein | |||
| 2780 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0146ORF2780P |
| 2785 | DNA-binding transcriptional regulator Fis | |||
| 7135 | DUF1382 family protein | |||
| 7140 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0146ORF7140P |
| 7145 | PerC family transcriptional regulator | |||
| 10250 | phosphohydrolase | |||
| 10255 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0146DcmP |
| 10260 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0146DcmP |
| 10265 | drug/metabolite exporter YedA | |||
| 13790 | DUF3927 family protein | |||
| 13805 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0146ORF13805P |
| 13810 | TrmB family transcriptional regulator | |||
| 16070 | helix-turn-helix domain-containing protein | |||
| 16075 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0146ORF16075P | |
| 16080 | 71 aa hypothetical protein | |||
| 19740 | phage lysis protein EssD | |||
| 19745 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0146ORF19745P | |
| 19750 | 95 aa hypothetical protein | |||
| 19785 | LexA family transcriptional regulator | |||
| 19790 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0146ORF19790P |
| 19795 | PerC family transcriptional regulator | |||
| 22980 | response regulator receiver domain | |||
| 22985 | R | EcosS3ORF15775P (100% identity) | EcoC0146ORF22990P | |
| 22990 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0146ORF22990P | |
| 22995 | conjugal transfer protein TraG N-terminal | |||
| plasmid pC17EC0146-2 | ||||
| 25615 | 103 aa hypothetical protein | |||
| 25620 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0146ORF25620P |
| 25625 | 73 aa hypothetical protein | |||