Escherichia coli D16EC0666 |
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Putative Escherichia coli D16EC0666 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,112,541 bp | CP088593 |
| plasmid pD16EC0666-1: | 133,783 bp | CP088594 |
| plasmid pD16EC0666-2: | 95,615 bp | CP088595 |
REBASE acronym: EcoC0666
Org_num: 53691
All begin LQQ77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16970 | type IV toxin-antitoxin system AbiEi family | |||
| 16975 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0666ORF16980P |
| 16980 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0666ORF16980P |
| 16985 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0666ORF16980P |
| 16990 | ash family protein | |||
| 18800 | restriction endonuclease | |||
| 18805 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0666ORF18805P |
| 18810 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0666ORF18805P |
| 18815 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0666ORF18805P |
| 18820 | endoribonuclease SymE | |||
| plasmid pD16EC0666-1 | ||||
| 25560 | IS1-like element IS1A family transposase | |||
| 25565 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoC0666ORF25575P |
| 25570 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoC0666ORF25575P |
| 25575 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoC0666ORF25575P |
| 25580 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7655 | phosphohydrolase | |||
| 7660 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0666DcmP |
| 7665 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0666DcmP |
| 7670 | drug/metabolite exporter YedA | |||
| 11195 | DUF3927 family protein | |||
| 11210 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0666ORF11210P |
| 11215 | TrmB family transcriptional regulator | |||
| 13470 | helix-turn-helix domain-containing protein | |||
| 13475 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0666ORF13475P | |
| 13480 | 71 aa hypothetical protein | |||
| 19150 | McrC family protein | |||
| 19155 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0666ORF19160P |
| 19160 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0666ORF19160P |
| 19165 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0666ORF19160P |
| 19170 | helix-turn-helix domain-containing protein | |||
| 24610 | cell division protein DamX | |||
| 24615 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0666DamP |
| 24620 | ribulose-phosphate 3-epimerase | |||
| plasmid pD16EC0666-1 | ||||
| 25500 | 73 aa hypothetical protein | |||
| 25505 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0666ORF25505P |
| 25510 | 103 aa hypothetical protein | |||
| plasmid pD16EC0666-2 | ||||
| 26425 | 73 aa hypothetical protein | |||
| 26430 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoC0666ORF26430P | |
| 26435 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19140 | glycosyltransferase | |||
| 19145 | R | EcosS3McrBP (100% identity) | EcoC0666McrBP | |
| 19150 | R | EcosS9McrCP (100% identity) | EcoC0666McrCP | |
| 19155 | Alw26I/Eco31I/Esp3I family type II restriction | |||