Escherichia coli E16EC0835 |
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Putative Escherichia coli E16EC0835 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,037,702 bp | CP088514 |
| plasmid pE16EC0835-1: | 59,605 bp | CP088515 |
REBASE acronym: EcoC0835
Org_num: 53730
All begin LQT35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1415 | restriction endonuclease | |||
| 1420 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0835ORF1420P |
| 1425 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0835ORF1420P |
| 1430 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0835ORF1420P |
| 1435 | endoribonuclease SymE | |||
| 24040 | type IV toxin-antitoxin system AbiEi family | |||
| 24045 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0835ORF24050P |
| 24050 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0835ORF24050P |
| 24055 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0835ORF24050P |
| 24060 | ash family protein | |||
| plasmid pE16EC0835-1 | ||||
| 24865 | IS1-like element IS1A family transposase | |||
| 24870 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0835ORF24870P | |
| 24875 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2610 | response regulator receiver domain | |||
| 2615 | R | EcosS3ORF15775P (100% identity) | EcoC0835ORF2620P | |
| 2620 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0835ORF2620P | |
| 2625 | conjugal transfer protein TraG N-terminal | |||
| 7540 | DUF2556 family protein | |||
| 7545 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0835ORF7545P |
| 7550 | DNA-binding transcriptional regulator Fis | |||
| 11565 | DUF1382 family protein | |||
| 11570 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0835ORF11570P |
| 11575 | PerC family transcriptional regulator | |||
| 14680 | phosphohydrolase | |||
| 14685 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0835DcmP |
| 14690 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0835DcmP |
| 14695 | drug/metabolite exporter YedA | |||
| 18250 | DUF3927 family protein | |||
| 18265 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0835ORF18265P |
| 18270 | TrmB family transcriptional regulator | |||
| 20535 | helix-turn-helix domain-containing protein | |||
| 20540 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0835ORF20540P | |
| 20545 | 71 aa hypothetical protein | |||
| 24220 | phage lysis protein EssD | |||
| 24225 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0835ORF24225P | |
| 24230 | 95 aa hypothetical protein | |||
| 24265 | LexA family transcriptional regulator | |||
| 24270 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0835ORF24270P |
| 24275 | PerC family transcriptional regulator | |||
| plasmid pE16EC0835-1 | ||||
| 24800 | 73 aa hypothetical protein | |||
| 24805 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0835ORF24805P |
| 24810 | 103 aa hypothetical protein | |||