Escherichia coli E17EC0383 |
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Putative Escherichia coli E17EC0383 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,286,938 bp | CP088468 |
| plasmid pE17EC0383-1: | 125,482 bp | CP088469 |
| plasmid pE17EC0383-2: | 92,796 bp | CP088470 |
REBASE acronym: EcoC0383
Org_num: 53746
All begin LQQ74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4075 | endoribonuclease SymE | |||
| 4080 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoC0383ORF4090P |
| 4085 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoC0383ORF4090P |
| 4090 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoC0383ORF4090P |
| 4095 | restriction endonuclease | |||
| 6180 | ash family protein | |||
| 6185 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0383ORF6190P |
| 6190 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0383ORF6190P |
| 6195 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0383ORF6190P |
| 6200 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pE17EC0383-2 | ||||
| 26930 | IS1-like element IS1A family transposase | |||
| 26935 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0383ORF26935P | |
| 26940 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2505 | conjugal transfer protein TraG N-terminal | |||
| 2510 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0383ORF2510P | |
| 2515 | R | EcosS3ORF15775P (100% identity) | EcoC0383ORF2510P | |
| 2520 | response regulator receiver domain | |||
| 3830 | helix-turn-helix domain-containing protein | |||
| 3835 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0383ORF3835P |
| 3840 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0383ORF3835P |
| 3845 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0383ORF3835P |
| 3850 | McrC family protein | |||
| 5955 | PerC family transcriptional regulator | |||
| 5960 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0383ORF5960P |
| 5965 | LexA family transcriptional regulator | |||
| 6010 | 95 aa hypothetical protein | |||
| 6015 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0383ORF6015P | |
| 6020 | phage lysis protein EssD | |||
| 9695 | 71 aa hypothetical protein | |||
| 9700 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0383ORF9700P | |
| 9705 | helix-turn-helix domain-containing protein | |||
| 11980 | TrmB family transcriptional regulator | |||
| 11985 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0383ORF11985P |
| 12000 | DUF3927 family protein | |||
| 15540 | drug/metabolite exporter YedA | |||
| 15545 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0383DcmP |
| 15550 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0383DcmP |
| 15555 | phosphohydrolase | |||
| 18915 | PerC family transcriptional regulator | |||
| 18920 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0383ORF18920P |
| 18925 | DUF1382 family protein | |||
| 19445 | ANR family transcriptional regulator | |||
| 19450 | M | M1.Ecoi127aORF1280P (100% identity) | M1.EcoC0383ORF19450P | |
| 19455 | VRR-NUC domain-containing protein | |||
| 19460 | M | M.EcoSTEC640ORF7045P (100% identity) | M2.EcoC0383ORF19450P | |
| 19465 | 106 aa hypothetical protein | |||
| 23565 | DNA-binding transcriptional regulator Fis | |||
| 23570 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0383ORF23570P |
| 23575 | DUF2556 family protein | |||
| 24165 | ribulose-phosphate 3-epimerase | |||
| 24170 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0383DamP |
| 24175 | cell division protein DamX | |||
| plasmid pE17EC0383-1 | ||||
| 26675 | 103 aa hypothetical protein | |||
| 26680 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoC0383ORF26680P | |
| 26685 | 73 aa hypothetical protein | |||
| plasmid pE17EC0383-2 | ||||
| 26865 | 73 aa hypothetical protein | |||
| 26870 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0383ORF26870P |
| 26875 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15625 | integrase arm-type DNA-binding domain-containing | |||
| 15630 | M | M.Ecos164ORF9105P (100% identity) | ATCACC | M.EcoC0383ORF15630P |
| 15635 | R | Ecos164ORF9105P (100% identity) | ATCACC | EcoC0383ORF15630P |
| 15640 | prepilin-type N-terminal cleavage/methylation | |||