Escherichia coli E17EC0134 |
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Putative Escherichia coli E17EC0134 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,952,656 bp | CP088474 |
| plasmid pE17EC0134-1: | 128,656 bp | CP088475 |
| plasmid pE17EC0134-2: | 89,638 bp | CP088476 |
REBASE acronym: EcoC0134
Org_num: 53743
All begin LQT86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3040 | toll/interleukin-1 receptor domain-containing | |||
| 3045 | M | M1.EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | M1.EcoC0134ORF3045P |
| 3050 | M | M2.SflLIN11ORF19980P (99% identity) | CCCNNNNNGTG | M2.EcoC0134ORF3045P |
| 3055 | S | S.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | S.EcoC0134ORF3045P |
| 3060 | R | EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | EcoC0134ORF3045P |
| 3065 | N-6 DNA methylase | |||
| plasmid pE17EC0134-1 | ||||
| 24425 | IS1-like element IS1A family transposase | |||
| 24430 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoC0134ORF23675P |
| 23670 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoC0134ORF23675P |
| 23675 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoC0134ORF23675P |
| 23680 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11635 | TrmB family transcriptional regulator | |||
| 11640 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0134ORF11640P |
| 11655 | DUF3927 family protein | |||
| 21100 | DNA-binding transcriptional regulator Fis | |||
| 21105 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoC0134ORF21105P |
| 21110 | DUF2556 family protein | |||
| 21630 | ribulose-phosphate 3-epimerase | |||
| 21635 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0134DamP |
| 21640 | cell division protein DamX | |||
| plasmid pE17EC0134-1 | ||||
| 24365 | 73 aa hypothetical protein | |||
| 24370 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0134ORF24370P |
| 24375 | 103 aa hypothetical protein | |||
| plasmid pE17EC0134-2 | ||||
| 24595 | 103 aa hypothetical protein | |||
| 24600 | M | M.EcoOS400ORF29695P (100% identity) | SAY | M.EcoC0134ORF24600P |
| 24605 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3010 | NADPH-dependent aldehyde reductase Ahr | |||
| 3020 | R | EcoWW2ORF20220P (100% identity) | EcoC0134ORF3020P | |
| 3025 | 125 aa hypothetical protein | |||