Escherichia coli E17EC0402 |
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Putative Escherichia coli E17EC0402 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,190,695 bp | CP088463 |
| plasmid pE17EC0402-1: | 110,117 bp | CP088464 |
REBASE acronym: EcoC0402
Org_num: 53748
All begin LQT79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19595 | type IV toxin-antitoxin system AbiEi family | |||
| 19600 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0402ORF19605P |
| 19605 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0402ORF19605P |
| 19610 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0402ORF19605P |
| 19615 | ash family protein | |||
| 21680 | restriction endonuclease | |||
| 21685 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0402ORF21685P |
| 21690 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0402ORF21685P |
| 21695 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0402ORF21685P |
| 21700 | endoribonuclease SymE | |||
| plasmid pE17EC0402-1 | ||||
| 25825 | IS1-like element IS1A family transposase | |||
| 25830 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0402ORF25830P | |
| 25835 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2165 | cell division protein DamX | |||
| 2170 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0402DamP |
| 2175 | ribulose-phosphate 3-epimerase | |||
| 2765 | DUF2556 family protein | |||
| 2770 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0402ORF2770P |
| 2775 | DNA-binding transcriptional regulator Fis | |||
| 7135 | DUF1382 family protein | |||
| 7140 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0402ORF7140P |
| 7145 | PerC family transcriptional regulator | |||
| 10245 | phosphohydrolase | |||
| 10250 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0402DcmP |
| 10255 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0402DcmP |
| 10260 | drug/metabolite exporter YedA | |||
| 13785 | DUF3927 family protein | |||
| 13800 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0402ORF13800P |
| 13805 | TrmB family transcriptional regulator | |||
| 16100 | helix-turn-helix domain-containing protein | |||
| 16105 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0402ORF16105P | |
| 16110 | 71 aa hypothetical protein | |||
| 19775 | phage lysis protein EssD | |||
| 19780 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0402ORF19780P | |
| 19785 | 95 aa hypothetical protein | |||
| 19820 | LexA family transcriptional regulator | |||
| 19825 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0402ORF19825P |
| 19830 | PerC family transcriptional regulator | |||
| 22970 | response regulator receiver domain | |||
| 22975 | R | EcosS3ORF15775P (100% identity) | EcoC0402ORF22980P | |
| 22980 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0402ORF22980P | |
| 22985 | conjugal transfer protein TraG N-terminal | |||
| plasmid pE17EC0402-1 | ||||
| 25750 | 73 aa hypothetical protein | |||
| 25755 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0402ORF25755P |
| 25760 | 103 aa hypothetical protein | |||