Escherichia coli F16EC0186 |
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Putative Escherichia coli F16EC0186 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,051,916 bp | CP088436 |
| plasmid pF16EC0186-1: | 103,314 bp | CP088437 |
| plasmid pF16EC0186-2: | 71,661 bp | CP088438 |
| plasmid pF16EC0186-6: | 109,422 bp | CP088442 |
REBASE acronym: EcoC0186
Org_num: 53774
All begin LQR13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3605 | endoribonuclease SymE | |||
| 3610 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0186ORF3620P |
| 3615 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0186ORF3620P |
| 3620 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0186ORF3620P |
| 3625 | restriction endonuclease | |||
| 5435 | ash family protein | |||
| 5440 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0186ORF5445P |
| 5445 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0186ORF5445P |
| 5450 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0186ORF5445P |
| 5455 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pF16EC0186-6 | ||||
| 26440 | IS1-like element IS1A family transposase | |||
| 26445 | M | M.SenceORFJP (99% identity) | M.EcoC0186ORF26445P | |
| 26450 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3255 | helix-turn-helix domain-containing protein | |||
| 3260 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0186ORF3260P |
| 3265 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0186ORF3260P |
| 3270 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0186ORF3260P |
| 3275 | McrC family protein | |||
| 8925 | 134 aa hypothetical protein | |||
| 8930 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0186ORF8930P | |
| 8935 | helix-turn-helix domain-containing protein | |||
| 11210 | TrmB family transcriptional regulator | |||
| 11215 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0186ORF11215P |
| 11230 | DUF3927 family protein | |||
| 14750 | drug/metabolite exporter YedA | |||
| 14755 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0186DcmP |
| 14760 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0186DcmP |
| 14765 | phosphohydrolase | |||
| 22305 | DNA-binding transcriptional regulator Fis | |||
| 22310 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0186ORF22310P |
| 22315 | DUF2556 family protein | |||
| 22905 | ribulose-phosphate 3-epimerase | |||
| 22910 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0186DamP |
| 22915 | cell division protein DamX | |||
| plasmid pF16EC0186-1 | ||||
| 25055 | 103 aa hypothetical protein | |||
| 25060 | M | M.EcoSTEC636ORF25980P (100% identity) | SAY | M.EcoC0186ORF25060P |
| 25065 | 73 aa hypothetical protein | |||
| plasmid pF16EC0186-2 | ||||
| 25720 | 73 aa hypothetical protein | |||
| 25725 | M | M.Kpn121ORF28445P (100% identity) | M.EcoC0186ORF25725P | |
| 25730 | 103 aa hypothetical protein | |||
| plasmid pF16EC0186-6 | ||||
| 26380 | 73 aa hypothetical protein | |||
| 26385 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0186ORF26385P |
| 26390 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pF16EC0186-1 | ||||
| 25180 | 116 aa hypothetical protein | |||
| 25185 | M | M.Eco9048ORF5553P (100% identity) | M.EcoC0186ORF25185P | |
| 25190 | R | Eco9048ORF5553P (100% identity) | EcoC0186ORF25185P | |
| 25195 | TraM recognition domain-containing protein | |||