Escherichia coli F16EC0278 |
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Putative Escherichia coli F16EC0278 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,084,120 bp | CP088417 |
| plasmid pF16EC0278-1: | 115,496 bp | CP088418 |
REBASE acronym: EcoEC0278
Org_num: 53778
All begin LQT66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20770 | DUF262 domain-containing HNH endonuclease family | |||
| 20775 | R | EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | EcoEC0278ORF20780P |
| 20780 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoEC0278ORF20780P |
| 20785 | S | S.EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | S.EcoEC0278ORF20780P |
| 20790 | endoribonuclease SymE | |||
| 21005 | DUF4942 domain-containing protein | |||
| 21010 | M | M.EcoZ151ORF20915P (100% identity) | M.EcoEC0278ORF21010P | |
| 21015 | S | S.EcoI605ORF22375P (100% identity) | S.EcoEC0278ORF21010P | |
| 21020 | R | EcoZ151ORF20915P (100% identity) | EcoEC0278ORF21010P | |
| 21030 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2310 | cell division protein DamX | |||
| 2315 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEC0278DamP |
| 2320 | ribulose-phosphate 3-epimerase | |||
| 2850 | DUF2556 family protein | |||
| 2855 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoEC0278ORF2855P |
| 2860 | DNA-binding transcriptional regulator Fis | |||
| 10105 | phosphohydrolase | |||
| 10110 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoEC0278DcmP |
| 10115 | V | V.EcosE1DcmP (74% identity) | V.EcoEC0278DcmP | |
| 10120 | drug/metabolite exporter YedA | |||
| 20985 | HNH endonuclease | |||
| 20990 | R | EcoZ151ORF20895P (100% identity) | EcoEC0278ORF20990P | |
| 20995 | McrC family protein | |||
| 21785 | transposase | |||
| 21790 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoEC0278ORF21795P |
| 21795 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoEC0278ORF21795P |
| 21800 | integrase | |||
| plasmid pF16EC0278-1 | ||||
| 24590 | 73 aa hypothetical protein | |||
| 24595 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoEC0278ORF24595P |
| 24600 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20990 | HNH endonuclease | |||
| 20995 | R | EcoZ151McrCP (100% identity) | EcoEC0278McrCP | |
| 21000 | R | EcoZ151McrBP (100% identity) | EcoEC0278McrBP | |
| 21005 | DUF4942 domain-containing protein | |||