Escherichia coli F16EC0456 |
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Putative Escherichia coli F16EC0456 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,834,434 bp | CP088400 |
| plasmid pF16EC0456-2: | 167,679 bp | CP088402 |
| plasmid pF16EC0456-3: | 105,124 bp | CP088403 |
REBASE acronym: EcoEC0456
Org_num: 53784
All begin LQT22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12285 | 188 aa hypothetical protein | |||
| 12290 | R | Ecod6c8ORFCP (100% identity) | EcoEC0456ORF12300P | |
| 12295 | S | S.Ecod6c8ORFCP (100% identity) | S.EcoEC0456ORF12300P | |
| 12300 | M | M.Ecod6c8ORFCP (100% identity) | M.EcoEC0456ORF12300P | |
| 12305 | restriction endonuclease subunit S | |||
| 13985 | DUF4942 domain-containing protein | |||
| 13990 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.EcoEC0456ORF13990P |
| 13995 | S | S.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | S.EcoEC0456ORF13990P |
| 14000 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | EcoEC0456ORF13990P |
| 14005 | 50 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3200 | 55 aa hypothetical protein | |||
| 3205 | M | M.SflFF87ORF9260P (100% identity) | GATC | M.EcoEC0456ORF3205P |
| 3210 | 57 aa hypothetical protein | |||
| 5140 | DUF977 family protein | |||
| 5145 | M | M.Eco62AORF6030P (90% identity) | M.EcoEC0456ORF5145P | |
| 5150 | IS66-like element accessory protein TnpA | |||
| 11860 | phage lysis protein EssD | |||
| 11865 | M | M.Ecoi012ORF10825P (100% identity) | M.EcoEC0456ORF11865P | |
| 11870 | 67 aa hypothetical protein | |||
| 13965 | HNH endonuclease | |||
| 13970 | R | SflSTLE4ORF19250P (100% identity) | EcoEC0456ORF13970P | |
| 13975 | McrC family protein | |||
| 14360 | sigma 54-interacting transcriptional regulator | |||
| 14365 | R | Ecop10BORF20145P (100% identity) | EcoEC0456ORF14365P | |
| 14370 | IS21-like element IS100 family transposase | |||
| 18945 | cell division protein DamX | |||
| 18950 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEC0456DamP |
| 18955 | ribulose-phosphate 3-epimerase | |||
| 19560 | DUF2556 family protein | |||
| 19565 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoEC0456ORF19565P |
| 19570 | DNA-binding transcriptional regulator Fis | |||
| 22610 | TraR/DksA family transcriptional regulator | |||
| 22615 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.EcoEC0456ORF22615P |
| 22620 | replication endonuclease | |||
| plasmid pF16EC0456-2 | ||||
| 24150 | 73 aa hypothetical protein | |||
| 24155 | M | M.Sen527ORF25750P (100% identity) | M.EcoEC0456ORF24155P | |
| 24160 | 97 aa hypothetical protein | |||
| plasmid pF16EC0456-3 | ||||
| 25085 | 101 aa hypothetical protein | |||
| 25090 | M | M.SspPIBORF23080P (100% identity) | M.EcoEC0456ORF25090P | |
| 25095 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13970 | HNH endonuclease | |||
| 13975 | R | SflSTLE4McrCP (100% identity) | EcoEC0456McrCP | |
| 13980 | R | SflSTLE4McrBP (100% identity) | EcoEC0456McrBP | |
| 13985 | DUF4942 domain-containing protein | |||