Escherichia coli F16EC0589 |
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Putative Escherichia coli F16EC0589 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,057,617 bp | CP088383 |
| plasmid pF16EC0589-1: | 91,937 bp | CP088384 |
| plasmid pF16EC0589-3: | 70,810 bp | CP088386 |
REBASE acronym: EcoEC0589
Org_num: 53789
All begin LQR27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3010 | endoribonuclease SymE | |||
| 3015 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoEC0589ORF3020P |
| 3020 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoEC0589ORF3020P |
| 3025 | R | EcoC0216ORF28175P (100% identity) | AACNNNNNNGTGC | EcoEC0589ORF3020P |
| 3030 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2660 | helix-turn-helix domain-containing protein | |||
| 2665 | M | M1.EcoE956ORF2080P (100% identity) | M1.EcoEC0589ORF2665P | |
| 2670 | M | M2.EcoE956ORF2080P (100% identity) | M2.EcoEC0589ORF2665P | |
| 2675 | S | S.EcoE956ORF2080P (100% identity) | S.EcoEC0589ORF2665P | |
| 2680 | protein kinase | |||
| 14130 | drug/metabolite exporter YedA | |||
| 14135 | V | V.Fnu048DcmP (100% identity) | V.EcoEC0589DcmP | |
| 14140 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoEC0589DcmP |
| 14145 | phosphohydrolase | |||
| 21420 | DNA-binding transcriptional regulator Fis | |||
| 21425 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoEC0589ORF21425P |
| 21430 | DUF2556 family protein | |||
| 21950 | ribulose-phosphate 3-epimerase | |||
| 21955 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoEC0589DamP |
| 21960 | cell division protein DamX | |||
| plasmid pF16EC0589-1 | ||||
| 24710 | glutamine--tRNA ligase | |||
| 24715 | M | M.EcoF374ORF52420P (90% identity) | M.EcoEC0589ORF24715P | |
| 24720 | 216 aa hypothetical protein | |||
| plasmid pF16EC0589-3 | ||||
| 25240 | 97 aa hypothetical protein | |||
| 25245 | M | M.Ssop356ORFAP (100% identity) | M.EcoEC0589ORF25245P | |
| 25250 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3025 | type I restriction-modification system | |||
| 3030 | R | Ssp28760MrrP (100% identity) | EcoEC0589MrrP | |
| 3035 | GTPase | |||