Escherichia coli 811034 |
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Putative Escherichia coli 811034 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 33271
| Sequence length: | GenBank #: | |
| Chromosome: | 5,555,205 bp | CP088028 |
| plasmid p811034: | 95,368 bp | CP088029 |
REBASE acronym: Eco811034
Org_num: 53575
All begin F8Z70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3395 | endoribonuclease SymE | |||
| 3400 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco811034ORF3405P |
| 3405 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco811034ORF3405P |
| 3410 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco811034ORF3405P |
| 3415 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3120 | transposase | |||
| 3125 | R | Ecos1613ORF26795P (100% identity) | Eco811034ORF3125P | |
| 3130 | N-acetylneuraminic acid mutarotase | |||
| 3160 | DEAD/DEAH box helicase | |||
| 3165 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco811034ORF3165P |
| 11515 | epoxyqueuosine reductase QueH | |||
| 11520 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M1.Eco811034ORF11520P |
| 11525 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco811034ORF11520P |
| 11530 | 90 aa hypothetical protein | |||
| 11535 | DUF968 domain-containing protein | |||
| 11540 | RusA family crossover junction | |||
| 11545 | antitermination protein | |||
| 11550 | TrmB family transcriptional regulator | |||
| 11555 | M | M.EcoZ910ORF13805P (100% identity) | M2.Eco811034ORF11520P | |
| 11560 | DUF1737 domain-containing protein | |||
| 13255 | DUF1737 domain-containing protein | |||
| 13270 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco811034ORF13270P | |
| 13275 | TrmB family transcriptional regulator | |||
| 15780 | drug/metabolite exporter YedA | |||
| 15785 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco811034DcmP |
| 15790 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco811034DcmP |
| 15795 | phosphohydrolase | |||
| 17875 | NinE family protein | |||
| 17880 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco811034ORF17880P |
| 17885 | recombination protein NinB | |||
| 20335 | NinE family protein | |||
| 20340 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco811034ORF20340P |
| 20345 | recombination protein NinB | |||
| 25235 | DNA-binding transcriptional regulator Fis | |||
| 25240 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco811034ORF25240P |
| 25245 | DUF2556 family protein | |||
| 25750 | ribulose-phosphate 3-epimerase | |||
| 25755 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco811034DamP |
| 25760 | cell division protein DamX | |||
| plasmid p811034 | ||||
| 28220 | 101 aa hypothetical protein | |||
| 28225 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco811034ORF28225P | |
| 28230 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3380 | DUF1127 domain-containing protein | |||
| 3385 | R | Ecos1613GmrSP (100% identity) | Eco811034GmrSP | |
| 3390 | R | EcosPA8GmrSDP (55% identity) | Eco811034GmrDP | |
| 3395 | endoribonuclease SymE | |||