Escherichia coli 114 |
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Putative Escherichia coli 114 RM systems
Ref: Hao,J. unpublished
REBASE ref # 33264
| Sequence length: | GenBank #: | |
| Chromosome: | 4,755,648 bp | CP087570 |
| plasmid p1OXA77: | 151,915 bp | CP087571 |
REBASE acronym: Ecos114
Org_num: 53257
All begin LOS76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12275 | IS1 family transposase | |||
| 12280 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Ecos114ORF12290P |
| 12285 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Ecos114ORF12290P |
| 12290 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Ecos114ORF12290P |
| 12295 | integrase core domain-containing protein | |||
| 20310 | transcription factor | |||
| 20315 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.Ecos114ORF20315P |
| 20320 | S | S.Ecos2020ORFCP (99% identity) | YTCANNNNNNGTTY | S.Ecos114ORF20315P |
| 20325 | DUF4433 domain-containing protein | |||
| 20330 | macro domain-containing protein | |||
| 20335 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | Ecos114ORF20315P |
| 20340 | M48 family metallopeptidase | |||
| plasmid p1OXA77 | ||||
| 23310 | IS1 family transposase | |||
| 23315 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNNCTGG | Ecos114ORF23325P |
| 23320 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Ecos114ORF23325P |
| 23325 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.Ecos114ORF23325P |
| 23330 | type II toxin-antitoxin system Phd/YefM family | |||
| 23860 | 62 aa hypothetical protein | |||
| 23865 | R | SenS1545ORF24780P (100% identity) | Ecos114ORF23870P | |
| 23870 | M | M.SenS1545ORF24780P (100% identity) | M.Ecos114ORF23870P | |
| 23875 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5405 | 345 aa hypothetical protein | |||
| 5410 | M | M.EcosE2ORF21575P (100% identity) | GGCC | M.Ecos114ORF5410P |
| 5415 | 68 aa hypothetical protein | |||
| 8485 | cell division protein DamX | |||
| 8490 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecos114DamP |
| 8495 | ribulose-phosphate 3-epimerase | |||
| 9110 | DUF2556 family protein | |||
| 9115 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Ecos114ORF9115P |
| 9120 | DNA-binding transcriptional regulator Fis | |||
| 15650 | phosphohydrolase | |||
| 15655 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Ecos114DcmP |
| 15660 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Ecos114DcmP |
| 15665 | drug/metabolite exporter YedA | |||
| plasmid p1OXA77 | ||||
| 23215 | 73 aa hypothetical protein | |||
| 23220 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Ecos114ORF23220P |
| 23225 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19665 | NADP-dependent isocitrate dehydrogenase | |||
| 19670 | R | EmaE2C08McrCP (100% identity) | Ecos114McrCP | |
| 19675 | R | EcoteDMcrBP (100% identity) | Ecos114McrBP | |
| 19680 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21520 | replication endonuclease | |||
| 21525 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Ecos114ORF21525P |
| 21530 | TraR/DksA family transcriptional regulator | |||