Rhizobium ruizarguesonis TA1 |
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Putative Rhizobium ruizarguesonis TA1 RM systems
Ref: Kohlmeier,M.G. et al. unpublished
REBASE ref # 33216
| Sequence length: | GenBank #: | |
| Chromosome: | 5,037,915 bp | CP088104 |
| plasmid pTA1_2: | 662,287 bp | CP088106 |
| plasmid pTA1_3: | 611,155 bp | CP088107 |
REBASE acronym: RruTA1
Org_num: 55084
All begin RlegTA1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTA1_3 | ||||
| 32000 | 60 aa hypothetical protein | |||
| 32005 | R | RleTA1ORF32055P (100% identity) | RruTA1ORF32005P | |
| 32010 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3685 | 393 aa hypothetical protein | |||
| 3690 | RM | RleTA1ORFEP (98% identity) | RruTA1ORF3690P | |
| 3695 | SDR family NAD(P)-dependent oxidoreductase | |||
| 9115 | LAGLIDADG family homing endonuclease | |||
| ??? | M | M.RleTA1ORFBP (100% identity) | M.RruTA1ORFAP | |
| 9125 | 66 aa hypothetical protein | |||
| 9130 | DUF4942 domain-containing protein | |||
| 9135 | M | M.RleTA1ORFCP (97% identity) | M.RruTA1ORF9135P | |
| 9140 | 52 aa hypothetical protein | |||
| plasmid pTA1_2 | ||||
| 28555 | IS5/IS1182 family transposase | |||
| 28560 | M | M.RleTA1ORF28625P (100% identity) | M.RruTA1ORF28560P | |
| 28565 | V | V.RleTA1ORF28625P (100% identity) | V.RruTA1ORF28560P | |
| 28570 | MvaI/BcnI restriction endonuclease family | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3565 | antibiotic biosynthesis monooxygenase | |||
| 3570 | M | M.RruTP53ORF6160P (100% identity) | GANTC | M.RruTA1ORF3570P |
| 3575 | nuclear transport factor 2 family protein | |||